Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0766 ATGAATACACTTCCAAATTCGTACGCCAATCAGCGAATTGCGAGAATCGCCTCTCACCTCAACCCTCCCAATCTCATCAAGGTTGAGGATGGTGATGCTTCTTCGTCTTTGTCACGTGCAAATTGCAGATCCAAAGGTGGTTCGTCCGGATTCAAAGTTGCGATTCTTGGTGCCGCAGGTGGCATAGGCCAGCCTCTCTCCTTGTTGATGAAGATGAACCCACTCGTTTCAGTTCTCCACCTATACGACGTCGTTAACACCCCCGGCGTCACCGCTGACGTCAGCCACATGGACACCGGCGCCGTCGTTCGGGGATTTTTGGGGCAGAAGCAGCTTGAGGATGCACTTATAGGAATGGACTTGGTGATCATTCCTGCTGGTGTTCCCCGAAAACCTGGGATGACAAGAGATGATCTCTTCAAAATAAATGCTGGAATTGTTAGAACGCTCTGTGAAGCAATTGCTAAGTCTTGTCCCAAGGCTATTGTGAACGTTATAAGCAACCCTGTTAACTCCACGGTTCCCATTGCTGCTGAGGTTTTCAAAAAAGCTGGTACTTATGATCCTAAGAGGCTTTTGGGAGTGACAAAGCTTGATGTTGTTAGAGCCAACACGTTTGTGGCTGAAGTTTTGGGTCTTGATCCAAGGGATGTGGATGTCCCTGTCATTGGGGGACATGCAGGAATCACAATTTTACCTCTTCTGTCTCAGGTTAAACCTCCAAGCTCTTTTACCCAGAAAGAAATTGAATACCTAACAGATCGCATACAAAATGGTGGAACTGAAGTTGTTGAGGCCAAAGCTGGAGCTGGCTCTGCAACATTATCAATGGCATATGCGGCCGTTAAATTTGCGGATGCATGCCTTCGTGCCCTGAGAGGAGATGCTGGCATCATTGAATGTGCATATATTGATTCACAGGTAACTGAACTTCCATTCTTTGCATCAAAAGTGCGACTTGGTCGTAGTGGGGTTGAGGAAATTCTTCCTCTTGGTCCCTTGAATGACTATGAAAGGGAAGCTTTGGAAAAGGCCAAGAAAGAGTTACTATCAAGCGTGGAGAAGGGAGTTTCTTTCGTCAGACAATGA 1089 0.4683 MNTLPNSYANQRIARIASHLNPPNLIKVEDGDASSSLSRANCRSKGGSSGFKVAILGAAGGIGQPLSLLMKMNPLVSVLHLYDVVNTPGVTADVSHMDTGAVVRGFLGQKQLEDALIGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEAIAKSCPKAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTKLDVVRANTFVAEVLGLDPRDVDVPVIGGHAGITILPLLSQVKPPSSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRALRGDAGIIECAYIDSQVTELPFFASKVRLGRSGVEEILPLGPLNDYEREALEKAKKELLSSVEKGVSFVRQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0766 362 SUPERFAMILY LDH C-terminal domain-like 195 360 IPR015955 GO:0003824|GO:0016616
Aev05g0766 362 Gene3D - 43 195 - -
Aev05g0766 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 48 194 IPR036291 -
Aev05g0766 362 Pfam lactate/malate dehydrogenase, NAD binding domain 52 194 IPR001236 GO:0016491
Aev05g0766 362 PANTHER MALATE AND LACTATE DEHYDROGENASE 5 361 - -
Aev05g0766 362 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 196 360 IPR022383 GO:0016616
Aev05g0766 362 ProSitePatterns Malate dehydrogenase active site signature. 195 207 IPR001252 GO:0006108|GO:0016615
Aev05g0766 362 CDD MDH_glyoxysomal_mitochondrial 51 360 IPR010097 GO:0006099|GO:0030060
Aev05g0766 362 PIRSF Lac_mal_DH 49 358 IPR001557 GO:0016616|GO:0019752
Aev05g0766 362 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 52 361 IPR010097 GO:0006099|GO:0030060
Aev05g0766 362 Gene3D - 196 362 IPR015955 GO:0003824|GO:0016616
Aev05g0766 362 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 5 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0766 Aev-Chr5 5350243 5353116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0766 K00026 - tcc:18611372 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0766 05 5350243 5353116 Aev05g0766 05 5350243 5353116 ECH