Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0634 ATGTCGAGTCTGAGTTTCCTTAAGTTTCAAAATAGCTTTTCATGGAAGTCCTCTTCTCCAAGAAAAAATCTATCCCAAAAGAACAGCTTTACTTCAAGCTCAAGGCAGACATCGAATGCCGGGACAGCGAGTTTCAAGCCGAAAGCAGAGGAAATTAAATGGGTGTTCCAGAAATTTGACACAAACAAAGACGGCAAGATCTCAGTGGAGGAGTACAAGGCGGCGGCGAGGGCCTTGGACAGGGGAATTGGTGATGCAGAGGCGGTTAAGGCGTTCAGGGCGATGGATACGGACGGAGATGGGTCCATAGACTTGAAGGAGTTCATGGAGATGTTTAATGGGGAGCAGGGGAAGGTGAGAGAGGCAGAGATCAAGAATGCTTTTCAGGTGTTTGACTTGAATGGTGATGGCAAGATAAGTGCTGAGGAATTGTCTCAAGTTCTCAAGAGGCTTGGTGAGAGTTGCAGCCTTAGTGCTTGTAGGAAAATGGTGAAAGGTGTTGATGGAAATGGAGATGGTTTCATTGACTTGAATGAGTTCATGAGGATGATGATGAGTGGCCAGAAACTAGCATAA 576 0.4601 MSSLSFLKFQNSFSWKSSSPRKNLSQKNSFTSSSRQTSNAGTASFKPKAEEIKWVFQKFDTNKDGKISVEEYKAAARALDRGIGDAEAVKAFRAMDTDGDGSIDLKEFMEMFNGEQGKVREAEIKNAFQVFDLNGDGKISAEELSQVLKRLGESCSLSACRKMVKGVDGNGDGFIDLNEFMRMMMSGQKLA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0634 191 Gene3D - 2 116 - -
Aev05g0634 191 ProSiteProfiles EF-hand calcium-binding domain profile. 47 82 IPR002048 GO:0005509
Aev05g0634 191 Gene3D - 117 190 - -
Aev05g0634 191 SMART efh_1 51 79 IPR002048 GO:0005509
Aev05g0634 191 SMART efh_1 87 115 IPR002048 GO:0005509
Aev05g0634 191 SMART efh_1 123 151 IPR002048 GO:0005509
Aev05g0634 191 SMART efh_1 159 187 IPR002048 GO:0005509
Aev05g0634 191 CDD EFh 123 185 IPR002048 GO:0005509
Aev05g0634 191 ProSiteProfiles EF-hand calcium-binding domain profile. 119 154 IPR002048 GO:0005509
Aev05g0634 191 ProSitePatterns EF-hand calcium-binding domain. 168 180 IPR018247 -
Aev05g0634 191 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Aev05g0634 191 PRINTS Recoverin family signature 91 112 - -
Aev05g0634 191 PRINTS Recoverin family signature 137 155 - -
Aev05g0634 191 PRINTS Recoverin family signature 115 134 - -
Aev05g0634 191 PANTHER CALCIUM-BINDING PROTEIN CML34-RELATED 1 190 - -
Aev05g0634 191 Pfam EF-hand domain pair 90 147 IPR002048 GO:0005509
Aev05g0634 191 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Aev05g0634 191 ProSitePatterns EF-hand calcium-binding domain. 96 108 IPR018247 -
Aev05g0634 191 SUPERFAMILY EF-hand 50 186 IPR011992 -
Aev05g0634 191 MobiDBLite consensus disorder prediction 13 44 - -
Aev05g0634 191 CDD EFh 51 112 IPR002048 GO:0005509
Aev05g0634 191 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 190 - -
Aev05g0634 191 Pfam EF hand 160 186 IPR002048 GO:0005509
Aev05g0634 191 Pfam EF hand 51 78 IPR002048 GO:0005509
Aev05g0634 191 ProSitePatterns EF-hand calcium-binding domain. 60 72 IPR018247 -
Aev05g0634 191 ProSiteProfiles EF-hand calcium-binding domain profile. 155 190 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0634 Aev-Chr5 4396913 4397488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0634 1 186 EF-hand Containing Proteins AT2G15680 45.312 6.35e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0634 K13448 - gmx:100787013 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0634 05 4396913 4397488 Aev05g0634 05 4396913 4397488 ECH