Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0612 ATGGTATCCGAATCGGAGCTCATCGGCCGCCTCCGCGAGTTCCTCCGGAGCTCCGACCTCACCACAACCACCACCGCCACCGTCCGCCGCCAGCTCGAGGCCGATTTCGGAATCGATTTGTCCGATAGGAAGGCATTCATTCGGGAACAGGTCGACTTTTTCCTTCAAAGCGTGCACAACCAACCGCAACACGAACAAGGGGAAGAAGAACAGCAAGAACAAGAACAGGAAGAGGAATATGATGTTAAACCCGAACGAAGCCGAGGCTCTGGTTCCAAGGAAGAAACAGAAGAAGATGGAGAAGAAGACGACGACGACGACGATGATGATAACGATGACGAAGAGGAAGAGGAAGAGAAACCGAAACATGTGCGGAATGGGAAGAAGAATAAAGAACGATCCGACAAGTCAGCTAATGAGGTAGTAAAGAAAAGAGGTGGCGGTTTTTGCAAACTATGTAGCCTGTCTCCGCAACTTCAGGAATTCGTTGGAGCATCAGAAATGGCCAGGACTGAGGTTGTCAAACAATTATGGAATTATATTAGGGAGAAAAAATTGCAAGACCCAAAGAATAAGAGAAACATAATTTGTGATGAACAATTTCGAGCCCTTTTTGGTGTCAATTCCATCGACATGTTCCAAATGAATAAAGCATTGTCAAAGCATATCTGGCCGTTGGATTCAAATGATGTTATCCAGGTGAAGTCAGCGCCAAAGGAAAAGCAGAAGCATGATAGAGAAGATGAAGATTCAGAGGAGCCAAAAAGAAAGGAAAAACGGCAGAAAGGGGGAAAATCAGGATTTCTTGCCCCTCTGCAACTATCCGAGGCCCTTGTAAACTTCCTTGGTACGGGAGAAAGTGAGTTATCAAGAGCTGCTGTGATTAAAAAAATGTGGGAGTACATAAAAAAGAACGACCTTCAGGATCCTTCCGACAAGAGGAGAATAATATGCGACGAGAAGCTGAAAGAACTCTTTGATCTCGACTCCTTCACTGGATTCACTGTTACCAAACTGCTGGCTCCACATTTTATAAAGACAGAGCAGTGA 1050 0.4552 MVSESELIGRLREFLRSSDLTTTTTATVRRQLEADFGIDLSDRKAFIREQVDFFLQSVHNQPQHEQGEEEQQEQEQEEEYDVKPERSRGSGSKEETEEDGEEDDDDDDDDNDDEEEEEEKPKHVRNGKKNKERSDKSANEVVKKRGGGFCKLCSLSPQLQEFVGASEMARTEVVKQLWNYIREKKLQDPKNKRNIICDEQFRALFGVNSIDMFQMNKALSKHIWPLDSNDVIQVKSAPKEKQKHDREDEDSEEPKRKEKRQKGGKSGFLAPLQLSEALVNFLGTGESELSRAAVIKKMWEYIKKNDLQDPSDKRRIICDEKLKELFDLDSFTGFTVTKLLAPHFIKTEQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0612 349 MobiDBLite consensus disorder prediction 118 140 - -
Aev05g0612 349 ProSiteProfiles SWIB/MDM2 domain profile. 148 225 IPR003121 -
Aev05g0612 349 CDD SWIB-MDM2_like 153 223 - -
Aev05g0612 349 MobiDBLite consensus disorder prediction 96 117 - -
Aev05g0612 349 MobiDBLite consensus disorder prediction 235 264 - -
Aev05g0612 349 MobiDBLite consensus disorder prediction 79 95 - -
Aev05g0612 349 SMART swib_2 149 228 IPR019835 -
Aev05g0612 349 SMART swib_2 268 349 IPR019835 -
Aev05g0612 349 Pfam DEK C terminal domain 2 55 IPR014876 -
Aev05g0612 349 Gene3D - 1 57 - -
Aev05g0612 349 SUPERFAMILY DEK C-terminal domain 3 56 - -
Aev05g0612 349 Pfam SWIB/MDM2 domain 152 223 IPR003121 -
Aev05g0612 349 Pfam SWIB/MDM2 domain 271 344 IPR003121 -
Aev05g0612 349 SUPERFAMILY SWIB/MDM2 domain 265 348 IPR036885 -
Aev05g0612 349 CDD SWIB-MDM2_like 272 344 - -
Aev05g0612 349 SUPERFAMILY SWIB/MDM2 domain 145 228 IPR036885 -
Aev05g0612 349 PANTHER SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN 1 347 - -
Aev05g0612 349 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 1 347 - -
Aev05g0612 349 Gene3D SWIB/MDM2 domain 262 349 IPR036885 -
Aev05g0612 349 ProSiteProfiles SWIB/MDM2 domain profile. 267 346 IPR003121 -
Aev05g0612 349 Gene3D SWIB/MDM2 domain 143 231 IPR036885 -
Aev05g0612 349 MobiDBLite consensus disorder prediction 59 140 - -
Aev05g0612 349 MobiDBLite consensus disorder prediction 235 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0612 Aev-Chr5 4205515 4210595 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Aev05g0612 SWIB 5.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0612 K15223 - gmx:100786835 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0612 05 4205515 4210595 Aev05g0612 05 4205515 4210595 ECH