Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0559 ATGACTACGATGCATTTGAGGCACTTCTTCTTCTTCTTCTGCAAGGGTAACCTCAACAACAGGTTAACCCTGCAAGTGCAAGCACGCTCCTATGCCCGCCACCCTTTTCCCAACAGAGTCTCTCACTACATTTACCGAGCAAAGCTCATTGACTCAATTCGTCTCTCTCTTCGTTCCAACAATCCCAACTCACTCCCCAATCTCTTGAACGATCGTCTCCTTGATTCCTTCGTGATCACTCAGGCCTTACGTTCTGCTCCTTCTGCAGATTCTGCACTCTCCCTTGTGCATGCCCTCGAGAAAACTGCACGTTTTTCGCATACTCAGCACACCCTCCATGCCCTTGCCACTGTGCTTGCCAAGTCTGGTCGAAGCTCTGAGCTCAAGTCACTCATTGATGCTATCCGTGCCAAACAGTTCGGTAATGATGTTAAGATTAGTTTCATGAATCTCATGCAGTGGCATGCTTTGGTTGGTGACCTTGACTCTGTTCTTGGTGTTTGGGATGAGTATAGCCTTTCCAGTGAGCGTGTCTGCACCGAGTCTTATAACATTGTCATGGCTCTTTGTGCGCGGATGGGTAAGGACTATGAGGTTGTAAGAGTTTTTCACAGGATGATTGATGAAGGGTCACTCCCGAATTGTAGAAGCTATACTATAATAATTGAGCACCTGGTAAAATGTGGGAAAGTATTGGAAGCCTTGGAGGTCTTTAAGGTTCTGCCTTCGATGAGGATCAAACGCACTTTGAAACAGTACTCCATTCTGCTCGATAGTTTCATTGCCAGCAAGCGGTTAGATGAAGTGAAAACATTGCTCAATGAAATGCAAGTTGATGGAATATTGCCTAGTCGAGCCATCTGTTTATCGCTGCAGAAGTTGCAGGAGGAAGGATTTCTTGAAGAGACTGACCTATTATTCAGAGAAAGTTTCCTAGATGAAAGAATCAAGAATGTAAGATATTCTGTTGAAAGCAGTGATGAGGATGAGGATGAGGATGAAAATGTAGGTGAAACTTGTCAATGTGACCATGTTGATGGGATCCACTTAAAGCCATGGATGGACCCACGGGCTTTGGCTAGTGCCTTACGGAAGTGGAGTCCTGATGAGGTGTCAGCACTAGAGGGTGCAAACTTTGTGTGGACAACCAGGTTGGTCTGTAAGGTACTTAGAAATTTCAAATCACCAGAAACTGCATGGAGTTTCTTCTGCTGGGTTGCTATTCAGCCTGGCTTTACACATGATATATACACAGTACAAAGAATCATGACCCTTTTAGCACGCCATGGACGAACAGAATTGGTTGATAGACTCATCTCCAAAATCAGAAGGGAGGGAATGAGATTGCCATTCAGCACTATCAGGCTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTAAAGATTTTCAATGACGATCGCATACTTTGTGGTCCCATATCAAAGTTTAATCTAATGCTTTTGTATTCTTCTCTGTTAAGAACATTAACCAAGTGTGGGAAGAACTCTGATGCATTGGATATGCTTGATGAGATGATTTTAAATGACATTTTCCCAGATATACAGACATTTTCGGGTCTAATGCATTATTTTTCAGAACTTGGAGATATTAAAACAGTGCAGAAACTCTTTTCAATGGTTAGGCAGAGCAGTCTAGAGCCAGATGCTTATATGTATAAGGTACTTATCCAAGGTTATTGCAAGTCAAAAAGAGCTGCACTAGCATGGAGGCTATTTGAAGATATGAAGAATTCAGGTCTGATGCCTGATTCTGCCACCAAAGAGTTGCTAGTGAAGAGCCTCTGGGGAGAAGGGAGACGGAGAGAGGCTGCAGCTGTGGAAGAGAGTTGTGAGGAAATAAATTCCCTTCCACGTGCATTGTGCGGTCATGTATGGACTGTCAGCTCTGCTAATCTAACAAAAGTTTATGATCTTTATTCAAATTGTTTTGCTTCCAATGATGGCTAG 1980 0.4318 MTTMHLRHFFFFFCKGNLNNRLTLQVQARSYARHPFPNRVSHYIYRAKLIDSIRLSLRSNNPNSLPNLLNDRLLDSFVITQALRSAPSADSALSLVHALEKTARFSHTQHTLHALATVLAKSGRSSELKSLIDAIRAKQFGNDVKISFMNLMQWHALVGDLDSVLGVWDEYSLSSERVCTESYNIVMALCARMGKDYEVVRVFHRMIDEGSLPNCRSYTIIIEHLVKCGKVLEALEVFKVLPSMRIKRTLKQYSILLDSFIASKRLDEVKTLLNEMQVDGILPSRAICLSLQKLQEEGFLEETDLLFRESFLDERIKNVRYSVESSDEDEDEDENVGETCQCDHVDGIHLKPWMDPRALASALRKWSPDEVSALEGANFVWTTRLVCKVLRNFKSPETAWSFFCWVAIQPGFTHDIYTVQRIMTLLARHGRTELVDRLISKIRREGMRLPFSTIRLIIDFYGISKNADAALKIFNDDRILCGPISKFNLMLLYSSLLRTLTKCGKNSDALDMLDEMILNDIFPDIQTFSGLMHYFSELGDIKTVQKLFSMVRQSSLEPDAYMYKVLIQGYCKSKRAALAWRLFEDMKNSGLMPDSATKELLVKSLWGEGRRREAAAVEESCEEINSLPRALCGHVWTVSSANLTKVYDLYSNCFASNDG* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 559 593 IPR002885 -
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 283 IPR002885 -
Aev05g0559 659 Gene3D Tetratricopeptide repeat domain 487 656 IPR011990 GO:0005515
Aev05g0559 659 TIGRFAM PPR: pentatricopeptide repeat domain 217 246 IPR002885 -
Aev05g0559 659 TIGRFAM PPR: pentatricopeptide repeat domain 182 215 IPR002885 -
Aev05g0559 659 TIGRFAM PPR: pentatricopeptide repeat domain 493 525 IPR002885 -
Aev05g0559 659 TIGRFAM PPR: pentatricopeptide repeat domain 253 284 IPR002885 -
Aev05g0559 659 TIGRFAM PPR: pentatricopeptide repeat domain 561 594 IPR002885 -
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 179 213 IPR002885 -
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Aev05g0559 659 Pfam PPR repeat family 558 604 IPR002885 -
Aev05g0559 659 PANTHER OS01G0167750 PROTEIN 21 657 IPR044175 -
Aev05g0559 659 Gene3D Tetratricopeptide repeat domain 80 346 IPR011990 GO:0005515
Aev05g0559 659 Pfam PPR repeat 493 519 IPR002885 -
Aev05g0559 659 Pfam PPR repeat 253 281 IPR002885 -
Aev05g0559 659 Pfam PPR repeat 217 242 IPR002885 -
Aev05g0559 659 Pfam PPR repeat 182 210 IPR002885 -
Aev05g0559 659 Gene3D Tetratricopeptide repeat domain 370 485 IPR011990 GO:0005515
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Aev05g0559 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 214 248 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0559 182 617 Glycosyltransferase AT1G05670 21.489 4.98e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0559 - - gmx:100779372 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0559 05 3869936 3871915 Aev05g0559 05 3869936 3871915 ECH