Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0554 ATGGCGCCATCGTACTGTGTGAAAGAGGGGAAGCCCTGTGTGCGTTGGGTTGAGAAATACTTCAGTGACTGCCTCTGTAATGTGAAAGATGACATCTCTTTCGGATTTGGCTTCATCAGCCTAATATGTTGGGGCGTTGCTGAAATTCCTCAGATAGTCACCAACTTTCGCACCAAGTCCAGCCATGGAGTCTCCTTAGCCTTTCTCCTTACTTGGGTTGCCGGAGATATATTCAACCTCGTGGGTTGCCTTCTAGAGCCAGCTACGTTGCCCACACAATACTATACAGCTCTGCTTTACACAACTACTACGATCGTATTAGTGCTGCAAAGCTTCTATTATGATTACATTTATAGATGGTGCAAGCGTCGTCAGAAGAACAACAACGAAAAGGTTGATGAAGACGAGAATAAAGCATTGAGACCAAAAGCAGGGCACGAGTCTGGGATTCCAATACCAAACGGCACACTCAAAGCAACACCACGACGAGAGTACTACTATACGTCAGCGAGATCATTGGCAGGGAGTGGAACCCCACCATTTCGAGCGTACATGAGAGCTGCAAAGAGTGGGCCTTCAGCCATGGAATTGAGCGATGATTCGTCGTCTGAGGATGAGCCTACTCTTTCTTCTACAAAGCCTAGACCCATTCCTCGTTCTGCAGCTGGACGCTATGGAACCTTTCTATCGGCATCGGTTAACTTGCCCATGCAGGGTCATGCTCTGAAAGAGGGATACATGAGATTAAATGGAAGAAAACTCTTGCAGCAGGACCAACCGGTTCACAGTGCATTGGGTCAATGGTTGGGATGGCTCATGGCTGCTATCTATATGGGTGGCCGACTCCCTCAAATATGGTTGAACATTAAAAGAGGGAGCGTGGAGGGCTTAAATCCTCTCATGTTCGTCTTTGCACTGATAGCTAATGCCACTTACGTCGGAAGTATTCTTGTACGAACTACTGAATGGACAAGCATCAAGGCTAACATGCCATGGTTGTTGGATGCCGTAGTTTGCGTGGCATTGGACCTATTTTACAGCTACTATAGATACTTCCGGAGGAGAGCAGCAAGTGATGAAAGTGATTATGGATACTACGAAGAAGCAACAAAAGCTTATGTGTCTTGA 1128 0.4672 MAPSYCVKEGKPCVRWVEKYFSDCLCNVKDDISFGFGFISLICWGVAEIPQIVTNFRTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTTTTIVLVLQSFYYDYIYRWCKRRQKNNNEKVDEDENKALRPKAGHESGIPIPNGTLKATPRREYYYTSARSLAGSGTPPFRAYMRAAKSGPSAMELSDDSSSEDEPTLSSTKPRPIPRSAAGRYGTFLSASVNLPMQGHALKEGYMRLNGRKLLQQDQPVHSALGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANATYVGSILVRTTEWTSIKANMPWLLDAVVCVALDLFYSYYRYFRRRAASDESDYGYYEEATKAYVS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0554 375 Gene3D - 35 135 - -
Aev05g0554 375 Gene3D - 266 366 - -
Aev05g0554 375 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 2 371 - -
Aev05g0554 375 SMART ctns 46 77 IPR006603 -
Aev05g0554 375 SMART ctns 279 310 IPR006603 -
Aev05g0554 375 MobiDBLite consensus disorder prediction 192 221 - -
Aev05g0554 375 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 2 371 - -
Aev05g0554 375 MobiDBLite consensus disorder prediction 128 154 - -
Aev05g0554 375 MobiDBLite consensus disorder prediction 128 143 - -
Aev05g0554 375 Pfam PQ loop repeat 265 323 IPR006603 -
Aev05g0554 375 Pfam PQ loop repeat 32 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0554 Aev-Chr5 3842681 3847174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0554 K23678 - gmx:100815310 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0554 05 3842681 3847174 Aev05g0554 05 3842681 3847174 ECH