Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0549 ATGCTCCAGAAAGCGGAAACCGTCAACAAAGTCTTGGACGCAGCTATTGCCATGAAAGAGCCCGAAAAGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGCGGCAAGAGGGTCCGTCCCCTGCTCTGCATCGCCGCCTGTGAGCTCGTCGGCGGCGACGAACAATCCGCCATCGCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCGCTAATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGAAAGCCCACAAACCACAAGGTCTTCGGCGAGGACGTTGCCGTCCTCGCCGGCGACGCCCTCCTCGCTTTCGCCTTCGAGCACGTGGCACTCTCCTCCGAAAATGTCCCTCCGGCGAGGGTGGTCCGCGCCATAGCAGAGTTAGCGAAATCCGTCGGATCAGAAGGACTCGTCGCGGGTCAAATCGTTGACATACAGTCTGAAGGGTTGACCGATGTTGGACTGGAGAAGCTGGAATTCATTCACCTGCATAAAACGGCGGCGTTGCTAGAAGCTGCGGTGGTGCTGGGGGCAATAATGGGTGGCGGTTCTGATGAGGAAGTTGAGAGGCTGAGGGTGTTTGCGAGGTGCATTGGGCTTCTGTTTCAGGTTGTGGATGATATTCTGGATGTGACAAAGTCTTCTGAGGAATTGGGGAAAACTGCAGGGAAGGATTTGGTTGCTGATAAGGTCACTTACCCTAAGCTTTTGGGGATTGACAGATCCAAGGAATTTGCTGACAAGTTGAACAAGGAAGCCAGGGACCAACTCCATGCTTTTGATCACCTTAAGGCTGCTCCTTTGCTTGCTCTTGCTGATTACATTGCCTACAGGCAAAATTAA 867 0.5548 MLQKAETVNKVLDAAIAMKEPEKIHEAMRYSLLAGGKRVRPLLCIAACELVGGDEQSAIAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVALSSENVPPARVVRAIAELAKSVGSEGLVAGQIVDIQSEGLTDVGLEKLEFIHLHKTAALLEAAVVLGAIMGGGSDEEVERLRVFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIDRSKEFADKLNKEARDQLHAFDHLKAAPLLALADYIAYRQN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0549 288 Gene3D Farnesyl Diphosphate Synthase 1 288 IPR008949 -
Aev05g0549 288 SFLD Isoprenoid Synthase Type I 3 286 - -
Aev05g0549 288 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 288 - -
Aev05g0549 288 SUPERFAMILY Terpenoid synthases 3 269 IPR008949 -
Aev05g0549 288 SFLD Polyprenyl Transferase Like 3 286 - -
Aev05g0549 288 CDD Trans_IPPS_HT 20 269 IPR000092 GO:0008299
Aev05g0549 288 Pfam Polyprenyl synthetase 22 259 IPR000092 GO:0008299
Aev05g0549 288 ProSitePatterns Polyprenyl synthases signature 2. 206 218 IPR033749 -
Aev05g0549 288 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 288 - -
Aev05g0549 288 ProSitePatterns Polyprenyl synthases signature 1. 73 89 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0549 Aev-Chr5 3802540 3803406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0549 K13789 - gmx:100778289 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0549 05 3802540 3803406 Aev05g0549 05 3802540 3803406 ECH
Aev05g0549 05 3802540 3803406 Aev01g0641 01 5885298 5886422 PCT