Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0548 ATGGCGGTGTTGAGGATTGCAGAGACAGCGAAGGTGGAAGAAAGGGGCTTAAGGAGGGTGGTGGTGGTTGTGGAGGGAAAGGGTACGATTGGAAATGCGAATGTGGGTGTGGGGGTTGTGCGGTTGAAGAAGGGAAGAACGGGAATTGTACCTAGACGCAGAGAACTCATCTTGGCCTTGGCTGCGTCAAAACAGAGTAGTGTGTGTTTGTGCCACTGTCTTGTTCTGCTTATATATAGAGTTAGGGGGGAATTGGAACCAGAAGAAATTCTTACAGTTTTTTGTTCTTTTGTACCCTATCAAGTCCAAGCTACTTTTGGAGATGGGTACAATTTGTTGGGACTTGAGAGTGATTGTTGGAATATGATCAAACTTTTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAAGTGGTGGAGCACCTGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGATATAAGTGAGCTGAATCTTCCAAAATCTTGTAACATACAATTCCCCAATGGCAAAGATGATCTGATGAACTTCGAAGTTTCAATTCGACCTGATGATGGATATTACTTAGGTGGCACATTTTTGTTTTCCTTCCAAGTATCTCCCATCTATCCACACGAGGCACCAAAGGTTAAGTGCAAGACAAAGGTCTACCATCCAAATATTGACTTGGAAGGAAATGTCTGTCTCAACATCTTGAGAGAAGATTGGAAACCTGTCCTCAATATAAACACAGTTATCTATGGCTTGTATCATCTATTCACGGAACCAAATTATGAGGACCCTCTGAATCATGATGCTGCTGGTGTGCTGAGAGACAACCCAAAGTTGTTTGAATCTAATGTGAGGAGGGCTATGGCTGGTGGGTATGTGGGGCAAACCTTTTTCCCTCGCTGTATCTAG 915 0.4339 MAVLRIAETAKVEERGLRRVVVVVEGKGTIGNANVGVGVVRLKKGRTGIVPRRRELILALAASKQSSVCLCHCLVLLIYRVRGELEPEEILTVFCSFVPYQVQATFGDGYNLLGLESDCWNMIKLFKVKEKQRELAENASGGAPVKKQSAGELRLHKDISELNLPKSCNIQFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAGVLRDNPKLFESNVRRAMAGGYVGQTFFPRCI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0548 304 CDD UBCc 154 288 IPR000608 -
Aev05g0548 304 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 150 295 IPR000608 -
Aev05g0548 304 PANTHER - 132 294 - -
Aev05g0548 304 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 132 294 - -
Aev05g0548 304 Gene3D Ubiquitin Conjugating Enzyme 146 304 IPR016135 -
Aev05g0548 304 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 222 237 IPR023313 -
Aev05g0548 304 SUPERFAMILY UBC-like 143 302 IPR016135 -
Aev05g0548 304 SMART ubc_7 153 295 - -
Aev05g0548 304 Pfam Ubiquitin-conjugating enzyme 154 289 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0548 Aev-Chr5 3796949 3802487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0548 K10579 - gmx:100813186 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0548 05 3796949 3802487 Aev05g0548 05 3796949 3802487 ECH