Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0504 ATGGCAACTGCAGCTAGGTTAACAACCTCGTGCGTGGCGGTTGCAGCTGCGGTGGCTGCCTCCTCCTCCACGCTCTCCGATCGCGCCTACGCTGACTCTTTCTTCCGCATCCCTTTCCTCTCTTCTTCTTCGCCTTCCAATTCCCCTTCGCCGTCCGACCCGGCTTCCGACGCCAGGTCGGATCCTCCGCCGCCAGATGAGCCAAACAAGTCGGGTTTTGATCCAGAATCGTTGGAAAGAGGCGCCAAAGCTCTCCGTGAAATCAATAGTTCTCCCTATTCTAAACAGGTGTTTGATTTAATGCGAAAGCAGGAACAAACTCGCCTTGCTGAGCTTGACGCTGAGAAAGTTCATTACGAACTTATTCAGTCTCAAGGAGATATTGAAAGGCAGCGGAAAATGGCTGAAGAACAACGGAATCTAATACAAGATCAAGCACAGAGAAAGGCCCAGGTTATGCGATATGAAGATGAGTTGGCAAGGAAAAGAATGCAGGCAGATCACGAAGCTCAAAGGCGACACAATGTTGAATTGGTCAAGATGCAAGAGGAGTCTTCTGTAAGAAAGGAGCAGGCAAGACGGGCAACTGAAGAACAGATTCAGTCTCAGCAGCGTCAGACTGAGAGAGAGAGAGCTGAGATAGAAAGAGAAACCATTAGAGTTAAGGCAATGGCAGAGGCTGAAGGTCGAGCCCATGAAGCAAAATTGACTGAGGATCATAAAAGGAGAATGCTTATAGAACGAATGCAAGGCGAAAGAGATAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATTGAAGGCGGTTTAAGGGTCTTATTGACTGATAGGGACAAATTGATTATGACTGTTGGGGGAGCTACTGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAGGTTACATGGGGCTATATCAATCGGATTTTGGGGCAGCCATCATTGATCCGCGAATCATCTATGGCAAAGTTTCCAGGGGCAAGGATCATATCTCTAGCCAAAAATAAAGTGTCGAATTACAGTACTTTGGCTAGAGCAGAAAGGCCTGCTGAGAGTCAAAATGGTCTGGGGAATGTAATCCTCCATCCATCATTGCAGAAAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGACCCATCAGGCACCATTCCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCCATGATGACCGGAGGAGATGTTGCACCTTTGGGCCCACAGGCTGTCACCAAAATCCATGAGATATTTGATTGGGCCAAGAAGTCTAATAAAGGCCTTTTGCTTTTCATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCATCCATATGAGTGAAGCTCAAAGAAGTGCTCTAAACGCATTGCTCTTCAGAACTGGTGATCAATCCAGAGACATAGTCCTTGTCCTCGCCACCAACAGACCAGGTGATCTTGACAGTGCAGTCACTGATCGCATTGACGAAGTGATCGAATTCCCGCTTCCAGGAGAGGAGGAGCGTCTAAAATTATTGAAGCTCTATTTGAACAAATATCTATGCCATGACAACAATGGTTCCAAGGGAGGCCTCTTGTTGAAGAAGCAGCCCCAGAAGATCACTGTAAAGGACTTATCTGAAGAAGTTCTGAGAGAGGCTGCGAAGAAAACAGAGGGGTTTTCAGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCGGTGTATGGTCGACCAGACTGCGTCTTGGATTCACAGTTGTTTAAAGAAATTGTAGATTACAAGGTGGTGGAACATCATCAGCGATTGAAACTCGCTGCTGAAGGTGGCATACCTGACCAAAAGCAATGA 1905 0.4677 MATAARLTTSCVAVAAAVAASSSTLSDRAYADSFFRIPFLSSSSPSNSPSPSDPASDARSDPPPPDEPNKSGFDPESLERGAKALREINSSPYSKQVFDLMRKQEQTRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQDQAQRKAQVMRYEDELARKRMQADHEAQRRHNVELVKMQEESSVRKEQARRATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHKRRMLIERMQGERDKWLAAINTTFSHIEGGLRVLLTDRDKLIMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGARIISLAKNKVSNYSTLARAERPAESQNGLGNVILHPSLQKRIEHLARATSNTKTHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNSIHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCHDNNGSKGGLLLKKQPQKITVKDLSEEVLREAAKKTEGFSGREIAKLMASVQAAVYGRPDCVLDSQLFKEIVDYKVVEHHQRLKLAAEGGIPDQKQ* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0504 634 Gene3D - 337 536 IPR027417 -
Aev05g0504 634 CDD AAA 386 519 - -
Aev05g0504 634 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 8 628 - -
Aev05g0504 634 SMART AAA_5 388 521 IPR003593 -
Aev05g0504 634 Pfam ATPase family associated with various cellular activities (AAA) 392 519 IPR003959 GO:0005524|GO:0016887
Aev05g0504 634 MobiDBLite consensus disorder prediction 39 55 - -
Aev05g0504 634 PANTHER PUTATIVE ATP-ASE 8 628 IPR039188 GO:0005739|GO:0007005
Aev05g0504 634 MobiDBLite consensus disorder prediction 56 70 - -
Aev05g0504 634 ProSitePatterns AAA-protein family signature. 491 510 IPR003960 GO:0005524|GO:0016887
Aev05g0504 634 Pfam ATPase family AAA domain-containing protein 3, N-terminal 67 320 IPR021911 -
Aev05g0504 634 Coils Coil 186 220 - -
Aev05g0504 634 Coils Coil 128 148 - -
Aev05g0504 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 615 IPR027417 -
Aev05g0504 634 MobiDBLite consensus disorder prediction 39 81 - -
Aev05g0504 634 MobiDBLite consensus disorder prediction 165 213 - -
Aev05g0504 634 MobiDBLite consensus disorder prediction 165 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0504 Aev-Chr5 3520073 3523748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0504 368 595 Miscellaneous Gene Families AT5G53170 29.114 8.13e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0504 K17681 - gmx:100777755 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0504 05 3520073 3523748 Aev05g0504 05 3520073 3523748 ECH