Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0474 ATGATGTTTTCGGGAAGAGAGATGCCATCGGCAACATCGATCTTCTCTGCATACGCCTCCATGACAGCGTCCATCATGCTGCTCCGGTCGCTGGCGAACGAGCTCATCCCTCAGCCAATCAGAGGGTATCTCTTCAACACCCTCAACTACTTCATCCGGCCGCGCTCCCACGCGCTGACCCTCATCATCGAGGACTCCTCCGGCATCGCCCGCAACCAGGTGTACGATGCAGCCGAGGCCTACTTGTCCACCAGAGTCACCCCCGACAACGAGCGCCTCAAGGTCTGCAAGACCCCCAAGGACAAGACCATCACCATCCGCCTCGAGAAAGGCGAGAAGCTCCTCGACCTCTTCCACGGCGTCCCCCTCAAGTGGCGCTTCATCTGCTCCGAGTCCGACCACCAGAAGAACACCTCCGCCGCGGACCACCACCCCAGCGTCTCCTCCATGAAGTCAGAGAAGAGGTACTTCGAGTTGAGCTTCCACAAGAAGCACAAGGAAGTGGTGGTGGGGTCGTATCTGCCGTTCATTCTGGAGAAGGCGAAGGAGATGAAGGAGGAGGAGAGGGTTCTGAAGATGCACACTCTGAACACGGCGTACTGCTACGCAGGGGTGAAGTGGGACTCCATCAACCTGGAGCACCCCTCGACGTTCGAGACGCTGGCGATGGAGAGGGAGCAGAAGGAGGCGATCATGGAGGACCTGAACAGGTTCGTGAAGAGGAAGGAGTTCTACAAGAGAGTGGGGAGGGCGTGGAAGCGCGGCTACTTGCTGTATGGGCCTCCCGGGACGGGGAAGTCCAGCTTGATTGCGGCTATGGCCAACTACTTGAAGTTCGATATCTATGATTTGCAGCTGGGTAACATAGTGAGGGACTCCGACCTCAGAAAGCTGCTTCTGGCAACTGCAAACAGGTCCATTTTGGTCATTGAAGACATTGATTGCACCGTCGACCTCCCAGAGCGCACCAGGCAATGGCATGGAGCAGCAGATCATGCACGTAAACCATCTGATGTCCAGTTAACACTGTCTGGATTACTGAACTTCATAGATGGGCTATGGTCAAGTTGCGGGGACGAGAGGATCATCATATTCACAACAAACCACAAGGAAAGGCTAGACCCTGCTCTGCTTCGCCCAGGAAGAATGGACATGCACATTCACATGTCCTACTGCTCCTACCCAGCCTTCAAGACTCTTGCCTCTAACTACTTGGAAATTTCCCATGATCACCAACTCTTTCGTGAGATTGAAGGCCTAATTGAGGACACTCAGATTACCCCTGCTCAGGTGGCGGAGGAACTGATGAAGAACGAGGACGCCGAGGCGGCGCTCCAAGGCTTCGTTAACCTCCTTAAGAGGAAGAAGATGGAAGGTGATGTTTGCACTGAGAATGATGGATCAGAAAAAGTAGAAACTCGGCAATCAAAAAAGCTTAAGGTTGGGTGCAAGCAAAAAAAAGGTGTTGCTGGTATTCGTAGTGGTGCTCAAAGAAGGACAAGAAGACTTAGAAGAGGTTCTAGTTTGTAA 1530 0.5346 MMFSGREMPSATSIFSAYASMTASIMLLRSLANELIPQPIRGYLFNTLNYFIRPRSHALTLIIEDSSGIARNQVYDAAEAYLSTRVTPDNERLKVCKTPKDKTITIRLEKGEKLLDLFHGVPLKWRFICSESDHQKNTSAADHHPSVSSMKSEKRYFELSFHKKHKEVVVGSYLPFILEKAKEMKEEERVLKMHTLNTAYCYAGVKWDSINLEHPSTFETLAMEREQKEAIMEDLNRFVKRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCTVDLPERTRQWHGAADHARKPSDVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYPAFKTLASNYLEISHDHQLFREIEGLIEDTQITPAQVAEELMKNEDAEAALQGFVNLLKRKKMEGDVCTENDGSEKVETRQSKKLKVGCKQKKGVAGIRSGAQRRTRRLRRGSSL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0474 509 CDD AAA 241 391 - -
Aev05g0474 509 PANTHER BCS1 AAA-TYPE ATPASE 7 469 - -
Aev05g0474 509 MobiDBLite consensus disorder prediction 489 509 - -
Aev05g0474 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 441 IPR027417 -
Aev05g0474 509 ProSitePatterns AAA-protein family signature. 361 379 IPR003960 GO:0005524|GO:0016887
Aev05g0474 509 Gene3D - 388 459 - -
Aev05g0474 509 PANTHER BNAA10G17020D PROTEIN 7 469 - -
Aev05g0474 509 Pfam ATPase family associated with various cellular activities (AAA) 257 390 IPR003959 GO:0005524|GO:0016887
Aev05g0474 509 SMART AAA_5 252 393 IPR003593 -
Aev05g0474 509 Gene3D - 205 387 IPR027417 -
Aev05g0474 509 Pfam Domain associated at C-terminal with AAA 36 128 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0474 Aev-Chr5 3312017 3315390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0474 232 387 Miscellaneous Gene Families AT5G53170 31.325 1.71e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0474 - - gmx:100785070 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0474 05 3312017 3315390 Aev05g0474 05 3312017 3315390 ECH