Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0473 ATGGCAATATACACAAAGAACCTTTCTTCCTACTTCACAGCCTTTCCATCAGCATCCTCATGGTTCGAGGTATATGCTGCCTTCTCCACATTCATGATGCTTCTCAGAACAGCAATCAACGATATGGTACCCCACCAAGTTCGATCCTTCATTGCCTCAAAGCTAGAGGCTTTCTTCACCAATTTCCAAGAAAGCAACCAAGTCTCTCTCAAAATTGACCGAAACTGGGATCGAAACTCCGGCAAGAACCGCAACGAACTTTACTATGCTGCTCATGATTACCTTCCAACCAGAATCAACCGAACATACAAAGCACTCAAAGTTGGCAAGCTTGAAGACTACAAGAACCTGGTGCTTGCAGTGGATGGAAATCATGAGGTGGTGGATGAATTTGAAGGCACCAAGTTCACATGGATGCTAGATGAGCCCAAAGAAAATGAGTCTTCTAAGCCCAAGTATACATTTACATTAAGCTTCAATGAGAAGCATAGAGACAAGGTAATGCAAAGGTACATACCACATGTCCTTAAAACATATGAGGCCATGAAAGCTGAGCAGAAGATTGTTAAAATCTATTCCAGGTTAGATGATTACTGGGAAGAGAGTGAGTTGTCTCATCCTGCTACATTCGACACGCTTGCCTTGAATCCCGGGTTGAAGAAAGCAATCGTTGACGATTTGGATCGGTTTTTGAGGAGGAAGGAGCTCTACAAGAGAGTGGGGAAGCCTTGGAAAAGAGGGTACCTTTTGTATGGACCTCCTGGAACTGGGAAATCAAGCCTCATTGCAGCCATTGCCAACTATTTGAAGTTCGATGTGTATGATTTGGAGCTCAACTCTGTTTCTTCTAACTCAGAGCTCATGAGAGCCATCCGGGACACTTGCAACCGTTCCATCATTGTTATAGAAGACATTGACTGCAACAAAGAGGTCCAAACTCGGTCAACAACAGACAAACTTTCAAATCCAGACTCAGATTCTGACAAGGATGGTAACAAGGTTAAGGGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGCTTGTGGTCAAGCTGTGGAGAGGAGCGGATTATTGTCTTCACCACTAACCACAAAGAGAGGATTGATCCAGCGTTGCTTCGCCCAGGTCGAATGGATATGCACATAAACTTGTCATTCCTTAAAGGGAAAGCTTTTCGAATATTGGCTTCCAATTATCTGGGCATTGAAGGGCATCACCCACTCTTTGAGCAGATTGATGAGCTACTGGAGAAAACAGAGGTAACCCCTGCTGTTGTGGCAGAGCATTTGATGAGAAATGAGGACCCTGATGTAGCCTTGGAAGCACTTGTTAAATTCCTCAGAGAAATGGATGTGGACAACCAACCAGCAGCAGAAGGAATCAACCCTAACGGCACCATGTCTGGAGAACTCTCTCCCAGGACAAGTTCTTTGAAGAGGAGAGCAATGAATGCATCAAACATGCTCAGGAATTCTCTGTCGAGGAAGGGGAGGCGGAGCAGCAAGGTTATGTCTGTCGAAATCGAGGACTTCCACGATGCTGAGGAGATGAAAGTTGTTGATGAGTTTCGTCAAGCACTTATATTGGATGAACTGCTTCCTGCAAAGCATGATGATTATCATATGATGCTTAGATTTCTAAAGGCAAGGAAATTTGATATTGAGAAAACAAAGCACATGTGGTCTGAAATGCTCAAGTGGAGGAAGGAATTTGGCGCTGACAGTATCTTAGGGGAATTTGAGTTTAAGGAAATCGACGAAGTGGTAAAATATTATCCCCAGGGACACCATGGAGTCGACAAAGAGGGACGACCTGTGTACATAGAGAAACTGGGACAAGTTGATCCCACCAAGCTCATGCAGGTTACAACCATGGAGCGCTATATCAAATACCATGTTCAGGAGTTCGAGAGGACTTTTGATGTCAAGTTTGCAGCTTGTTCCATTGCTGCAAAGAAGCATATCGATCAAAGCACAACCATCCTCGATGTGCAGGGAGTGGGGATTAAGAACTTCAGCAAAAGTGCAAGGGAGCTTGTCATGTCCCTTCAGAAGATTGATGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTCCTGGATTCAAAATTTTGTGGAACACCGTAAAAAGCTTCCTTGATCCTAAGACCGCATCAAAAATCCATGTTCTTGGCAACAAGTATGAAAGCAAATTGCTTGAAATAATTGAGGCAAGTCAATTGCCTAAGTTTTTAGGAGGTACCTGTACCTGTGCTGATCACGAAGGAGGTTGCATGCGTTCCGATAAGGGCCCATGGAAGGATCCAGAAATAATAAGGATGGTTCAAAATGGCGAACACAAATGTTCGAAAGGAAAAGAGCCTAAAGCTGTGGCTGTGGAAGAGACCATTCCTGAGGTGCAACACAACAAGAGTTCCAAAAAGCTCACTTCACAACTTTCTTCAGTAAGCGATGAGGGACACAAGTCTTCCAAGAGGATGGAGGCAAAGCTCACCAAACAACTTTCTTCAGTTAGTGATGGGGTCCCTGCGACCAAACCATCCAAGCATGAGGAACTTAGCCCGGTGCCAGAGAACCGTGTTTCTGTTTCAAAGAAGATTGACAAAGTTGTCCTGAACAACCATGTTTCAAAGAAGGTTAGCAAAGCTGACCTGACCGCAGCATCAAAAGAGTTTTTGACTGTGATGCAACGCATGGCTGAGTTGGAACAGAAAATGATCTGCATGAACCAACAGCCTACTGGCATGCCCCCTGAGAAGGAGGAAATGCTCAATTCTGCAATCACCCGAGCTGATGCCTTGGAGTTGCGTCTTTTGTCTACCAAGAAGGCATTGGAGACTTCACTCGCCAAGCAGGAGGAACTTTCGGCTTATGTCGAGAAAAAAAAGAAGAAGAAGAAGAAGTTGTTCTTCTTTTAA 2937 0.4447 MAIYTKNLSSYFTAFPSASSWFEVYAAFSTFMMLLRTAINDMVPHQVRSFIASKLEAFFTNFQESNQVSLKIDRNWDRNSGKNRNELYYAAHDYLPTRINRTYKALKVGKLEDYKNLVLAVDGNHEVVDEFEGTKFTWMLDEPKENESSKPKYTFTLSFNEKHRDKVMQRYIPHVLKTYEAMKAEQKIVKIYSRLDDYWEESELSHPATFDTLALNPGLKKAIVDDLDRFLRRKELYKRVGKPWKRGYLLYGPPGTGKSSLIAAIANYLKFDVYDLELNSVSSNSELMRAIRDTCNRSIIVIEDIDCNKEVQTRSTTDKLSNPDSDSDKDGNKVKGFTLSGLLNYMDGLWSSCGEERIIVFTTNHKERIDPALLRPGRMDMHINLSFLKGKAFRILASNYLGIEGHHPLFEQIDELLEKTEVTPAVVAEHLMRNEDPDVALEALVKFLREMDVDNQPAAEGINPNGTMSGELSPRTSSLKRRAMNASNMLRNSLSRKGRRSSKVMSVEIEDFHDAEEMKVVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKHMWSEMLKWRKEFGADSILGEFEFKEIDEVVKYYPQGHHGVDKEGRPVYIEKLGQVDPTKLMQVTTMERYIKYHVQEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGIKNFSKSARELVMSLQKIDGDNYPETLNRMFIINAGPGFKILWNTVKSFLDPKTASKIHVLGNKYESKLLEIIEASQLPKFLGGTCTCADHEGGCMRSDKGPWKDPEIIRMVQNGEHKCSKGKEPKAVAVEETIPEVQHNKSSKKLTSQLSSVSDEGHKSSKRMEAKLTKQLSSVSDGVPATKPSKHEELSPVPENRVSVSKKIDKVVLNNHVSKKVSKADLTAASKEFLTVMQRMAELEQKMICMNQQPTGMPPEKEEMLNSAITRADALELRLLSTKKALETSLAKQEELSAYVEKKKKKKKKLFFF* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0473 978 Pfam CRAL/TRIO domain 591 753 IPR001251 -
Aev05g0473 978 SUPERFAMILY CRAL/TRIO N-terminal domain 513 580 IPR036273 -
Aev05g0473 978 Gene3D - 384 451 - -
Aev05g0473 978 CDD AAA 233 386 - -
Aev05g0473 978 MobiDBLite consensus disorder prediction 806 865 - -
Aev05g0473 978 CDD SEC14 586 754 IPR001251 -
Aev05g0473 978 Pfam CRAL/TRIO, N-terminal domain 532 563 IPR011074 -
Aev05g0473 978 SMART sec14_4 585 756 IPR001251 -
Aev05g0473 978 MobiDBLite consensus disorder prediction 809 824 - -
Aev05g0473 978 ProSitePatterns AAA-protein family signature. 357 375 IPR003960 GO:0005524|GO:0016887
Aev05g0473 978 Gene3D - 200 383 IPR027417 -
Aev05g0473 978 PRINTS Cellular retinaldehyde-binding protein signature 712 731 - -
Aev05g0473 978 PRINTS Cellular retinaldehyde-binding protein signature 543 565 - -
Aev05g0473 978 PRINTS Cellular retinaldehyde-binding protein signature 745 754 - -
Aev05g0473 978 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 585 759 IPR001251 -
Aev05g0473 978 Gene3D - 484 572 - -
Aev05g0473 978 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 470 841 - -
Aev05g0473 978 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 869 974 - -
Aev05g0473 978 SMART CRAL_TRIO_N_2 540 565 IPR011074 -
Aev05g0473 978 Pfam ATPase family associated with various cellular activities (AAA) 249 385 IPR003959 GO:0005524|GO:0016887
Aev05g0473 978 SUPERFAMILY CRAL/TRIO domain 585 782 IPR036865 -
Aev05g0473 978 MobiDBLite consensus disorder prediction 313 332 - -
Aev05g0473 978 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 470 841 - -
Aev05g0473 978 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 869 974 - -
Aev05g0473 978 SMART AAA_5 244 389 IPR003593 -
Aev05g0473 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Aev05g0473 978 Gene3D - 573 785 IPR036865 -
Aev05g0473 978 Pfam Domain associated at C-terminal with AAA 43 140 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0473 Aev-Chr5 3299730 3308687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0473 519 750 Acyl Lipid Metabolism Gene Families AT5G47730 29.046 1.35e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0473 - - gmx:100527533 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0473 05 3299730 3308687 Aev05g0473 05 3299730 3308687 ECH