Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0435 ATGTCGTCCGATAATACCACCACCGCCGACAACGGATCCGGATCCGCCACCAACGGCGACGCCCCGCCCCCACCCCGCCGCAAGGTAGCCCTGATCACCGGCATCACTGGCCAAGACGGCTCCTACCTCACCGAATTGCTCCTCGAAAAGGGCTACGACGTCCACGGCCTCATCCGCCGCTCCTCAAACTTCAACACGCAGCGGATCGACCACATCTACGTGGACCCACACAACGCCCACAAGGCTCGCATGAAGCTCCACTACGCCGACCTCTCCGACGCCTCCTCCCTCCGCCGCTGGCTCGACACTATCCTCCCCGATGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGATCCCCGACTACACCGCCGACGTCGTCGCCACCGGCGCACTCCGCCTCCTCGAGGCCGTCCGCTCTCACATCGCCGCCACCAACCGCTCCCACATCCGCTACTACCAGGCCGGATCCTCAGAGATGTTCGGGTCCACACCTCCCCCTCAGTCCGAAACCACACCCTTCCACCCGAGATCCCCTTACGCTGCATCCAAGTGCGCGGCGCACTGGTACACCGTCAATTACCGCGAGGCATACGGGATCTTCGCCTGCAACGGTATCCTCTTCAACCACGAGTCCCCCCGTCGCGGTGAGAATTTCGTGACGCGCAAGATCACGCGGGCCGTGGGCCGGATCAAGATCGGGCTCCAGAGCAAGCTGTTCTTGGGGAACTTGCAGGCCTCGAGGGATTGGGGTTTTGCCGGGGACTATGTGGAGGCGATGTGGCTAATGCTGCAGCAGGAGAAGCCCGATGATTATGTTGTGGCGACGGAGGAGTCGCATACGGTGGAGGAGTTCTTGGAGGTGGCGTTTGGGTATGTTGGGTTGAATTGGAGGGACCATGTTGTGATTGATAAGAGGTATTTTAGGCCCACTGAGGTGGATAACCTCAAGGGTGATGCTGAGAAGGCGAAGAAAGTTCTTGGGTGGAAGCCTAAGGTTGGGTTTGAGCAGCTGGTGAAGATGATGGTGGATAATGATATTGAGCTTGCTAAGAAGGAGAAGGTTCTTGTTGATGCTGGCTACATTGATGCTCAACAACAACCTTGA 1122 0.5927 MSSDNTTTADNGSGSATNGDAPPPPRRKVALITGITGQDGSYLTELLLEKGYDVHGLIRRSSNFNTQRIDHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATNRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVIDKRYFRPTEVDNLKGDAEKAKKVLGWKPKVGFEQLVKMMVDNDIELAKKEKVLVDAGYIDAQQQP* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0435 373 Hamap GDP-mannose 4,6-dehydratase [gmd]. 28 357 IPR006368 GO:0008446|GO:0019673
Aev05g0435 373 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 28 354 IPR006368 GO:0008446|GO:0019673
Aev05g0435 373 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 11 368 IPR006368 GO:0008446|GO:0019673
Aev05g0435 373 MobiDBLite consensus disorder prediction 1 27 - -
Aev05g0435 373 Pfam GDP-mannose 4,6 dehydratase 31 347 IPR016040 -
Aev05g0435 373 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 11 368 - -
Aev05g0435 373 CDD GDP_MD_SDR_e 29 353 - -
Aev05g0435 373 Gene3D - 221 347 - -
Aev05g0435 373 Gene3D - 31 337 - -
Aev05g0435 373 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g0435 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 353 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0435 31 213 Miscellaneous Gene Families AT4G12250 28.796 2.11e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0435 K01711 - egr:104422747 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0435 05 3021632 3022753 Aev05g0435 05 3021632 3022753 ECH