Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0417 ATGGCTATCTTCGCTCTGTTCATCTTATTCTTCTTCCAACTCCTAACAGGTTCGTATTCGACAACATTCACAATAGTAAACAAGTGTAGTTACACGGTTTGGCCTGGGCTTTTATCCGGCGCCGGAACCTCGCCGCTCTCCACCACCGGCTTCGCCCTACAGTCTGGTGAATCAACTGCCGTCGCCGTCCCCGCCGGATGGTCCGGCCGCCTATGGGGCCGCACCCTCTGTACCCAGGATGCCACCACCGGAAAATTCACATGCGTCACCGGCGACTGCGGATCCTCCACCGTCGAATGCTCCGGTGGCGGCGCCGCCCCTCCCGCCACGCTCGCTGAGTTCACCCTCAATGGTGCCGGAGGGCTCGATTTCTTCGATGTCAGTCTCGTAGACGGTTACAATCTCCCCATGACGGTGGAGCCTCAGGGAGGAAGCGGCGGCGGAAACTGCTCGGCGACGGGGTGCGTTGTGGATCTGAACGCAGCGTGCCCGATGGAGCTGAAGGTGATGAGCAGCGGCGGCAGCGACGGTGGAGAGAGCGTGGCGTGCAAGAGCGCGTGCGAGGCATTCGGTGATCCGCAGTATTGTTGTAGTGGAGCTTACGGTACACCTGACACATGCAAGCCCAGCCAATACTCGGAGTTCTTCAAGAGCGCGTGCCCACGCGCCTATAGCTACGCCTATGACGATGGCACTAGCACCTTCACCTGTGCCTCCGCTGATTACCTCATCACTTTCTGCCCCACGCCTTCAACTAGTTCGATCAAATCGGGAAATGGGAAATACCCGATGGCGGTGCAAGTGTCAGCATCTGATCGCGTCTATGGGTCACGCACCAACCTCATAATGAAGCTGCTTATTGCTATTGCCTCCTCCTCCTATGCTTTGATGGCATTAATTAATTAA 906 0.5717 MAIFALFILFFFQLLTGSYSTTFTIVNKCSYTVWPGLLSGAGTSPLSTTGFALQSGESTAVAVPAGWSGRLWGRTLCTQDATTGKFTCVTGDCGSSTVECSGGGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMTVEPQGGSGGGNCSATGCVVDLNAACPMELKVMSSGGSDGGESVACKSACEAFGDPQYCCSGAYGTPDTCKPSQYSEFFKSACPRAYSYAYDDGTSTFTCASADYLITFCPTPSTSSIKSGNGKYPMAVQVSASDRVYGSRTNLIMKLLIAIASSSYALMALIN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0417 301 Gene3D Thaumatin 21 248 IPR037176 -
Aev05g0417 301 CDD TLP-PA 22 247 - -
Aev05g0417 301 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 5 268 - -
Aev05g0417 301 SUPERFAMILY Osmotin, thaumatin-like protein 21 248 IPR037176 -
Aev05g0417 301 SMART tha2 23 248 IPR001938 -
Aev05g0417 301 PIRSF PR5 1 293 IPR001938 -
Aev05g0417 301 Pfam Thaumatin family 27 248 IPR001938 -
Aev05g0417 301 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Aev05g0417 301 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Aev05g0417 301 PRINTS Pathogenesis-related protein signature 70 81 IPR001938 -
Aev05g0417 301 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Aev05g0417 301 ProSiteProfiles Thaumatin family profile. 20 248 IPR001938 -
Aev05g0417 301 PANTHER OS03G0233200 PROTEIN 5 268 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0417 Aev-Chr5 2875104 2876577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0417 6 253 Receptor kinase-like Gene Family AT5G38280 52.610 5.56e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0417 - - gmx:100806478 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0417 05 2875104 2876577 Aev05g0417 05 2875104 2876577 ECH
Aev07g0681 07 4323280 4325316 Aev05g0417 05 2875104 2876577 ECH
Aev08g0194 08 1082427 1084367 Aev05g0417 05 2875104 2876577 ECH
Aev07g0682 07 4336626 4338818 Aev05g0417 05 2875104 2876577 ECH