Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0416 ATGGCTCTGTTCTCACACCACCGACATTCTTCTCAACAGTTCTTGTGTTTCTTCCTCTTCCTCGTCTTCAAAGGGGCTTCAGGGGCCACATTCACGTTCGTGAACAAGTGCGATTACACAGTATGGCCAGGGATTCTGGGCAAACCAGAAATCGGAAGCACAGGATTCGAGCTCCAAAAAGGAGCCTCAAAAAGCTTCCAAGCTCCAACGGGATGGTCTGGAAGATTCTGGGGCAGAACATATTGCAAATTCGACGGTTCCGGCCGCGGAACCTGCTCCACCGCCGACTGCGGCTCCGGAGAGATCGCCTGCAACGGCGCCGGAGCCTCCCCGCCGGCGACCCTCGCTGAGTTCACCCTCGGCACCGGCTCCATGGACTACTACGACGTCAGCCTCGTCGACGGTTATAACCTCCCTATGTTGGTGGAGGCCTCTGGCGGCTCCGGCGCCTGTGCCGCCACAGGATGCGGCGCTGACCTCAATCGGCGGTGCCCGTCGGAGTTAAGAGTGGACGGCGGCGATGCGTGTAGGAGCGCATGTGATGCTTTTGGGAAGGCGGAGTATTGCTGCAACGGGGAGTTCGGCAACCCTTCCACGTGTAAGCCATCGGTGTACTCTCAAATTTTCAAATCTGCGTGTCCCAAATCTTATAGCTATGCCTACGATGATGCCACTAGCACCTTCACTTGTTCCGGAGCTGACTACACAATCACATTTTGTCCTTCTTCACCAAGTCTAAAGTCTTCAACGGATTCGCCTCCAAAGGCAACGGATTCGGATTCCGGGTCGGGGTCGGGTTCGGGTTCGGGTTCATCATCGGTGGAGCAATCTGCATTAGGATCAACTTCATGGCTAGCAGATATGGCTACGGCAACAGGGTCATCAACAAGGAGGAAGGCTTTTGGTGGTTCAAGGGGTTTATTATTCTTATTTTTTGTGGCTGTAACTTTCATTCTTTCTCTTTTGGTCGTTTAG 975 0.5395 MALFSHHRHSSQQFLCFFLFLVFKGASGATFTFVNKCDYTVWPGILGKPEIGSTGFELQKGASKSFQAPTGWSGRFWGRTYCKFDGSGRGTCSTADCGSGEIACNGAGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMLVEASGGSGACAATGCGADLNRRCPSELRVDGGDACRSACDAFGKAEYCCNGEFGNPSTCKPSVYSQIFKSACPKSYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSPPKATDSDSGSGSGSGSGSSSVEQSALGSTSWLADMATATGSSTRRKAFGGSRGLLFLFFVAVTFILSLLVV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0416 324 CDD TLP-PA 30 240 - -
Aev05g0416 324 Gene3D Thaumatin 29 241 IPR037176 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Aev05g0416 324 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Aev05g0416 324 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Aev05g0416 324 MobiDBLite consensus disorder prediction 244 275 - -
Aev05g0416 324 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 7 266 - -
Aev05g0416 324 PANTHER OS03G0233200 PROTEIN 7 266 IPR001938 -
Aev05g0416 324 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Aev05g0416 324 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Aev05g0416 324 Pfam Thaumatin family 35 241 IPR001938 -
Aev05g0416 324 SMART tha2 31 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0416 Aev-Chr5 2860712 2862086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0416 11 258 Receptor kinase-like Gene Family AT5G38280 46.743 1.03e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0416 - - gmx:100802906 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0416 05 2860712 2862086 Aev05g0416 05 2860712 2862086 ECH
Aev05g0416 05 2860712 2862086 Aev08g0194 08 1082427 1084367 ECH