Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0406 ATGGCTTCCACCTCCACCCATTTTTCCCTTTCTCTCTCCGCCAAACAGCTTGCAACTTCAACTTCTGCTGCTGCTGCTACCCGGAAACCCACCCACCTCTTCTCCCCGATTCAAAAACCTAACTTGGTCTCACCCCACCTCCTATTACGCTCTTCCAGCAACCACCCTTCTCAGAGGGCCCCTGTTTTTTTGACCTCAAGGATATGCGCTAGTTCCGCTCAAGTTATGGATCCTTCTGCTGCAAAGACCGAACCTGGGGTCCCCACAATCGTCGACGTCGATTTGGGCGATCGCAGCTATCCCATTTATATCGGATCCGGGTTACTTGACAAACCTGAGCTTCTCCAGAGGCATGTCCATGGAAAGAGGGTCCTTGTGGTCACTAACAACACAGTTGCACCACTGTATCTAGACAAAGTTATTGATGCTTTGACAAGGGGAAACCCTAATGTTTCTGTCGAGAGTGTCATTTTGCCAGATGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTCTTTGACAAGGCCATTGAGTCACGGTTGGATAGGCGAAGTACGTTTGTTGCCCTAGGAGGTGGTGTGATTGGTGACATGTGTGGCTTTGCTGCTGCTGCGTTCCTACGTGGTGTTAATTTTATTCAGATTCCTACCACTGTTATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAACCATAGCCTTGGAAAGAACCTAATTGGTGCTTTTTACCAACCTCAGTGTGTACTTATTGACACAGACACATTGAATACATTACCAGATAGGGAATTAGCATCAGGTTTTGCTGAGGTTATAAAGTATGGGCTAATTAGGGATGCAGAATTTTTTGAGTGGCAAGAAAAAAATATGCAGGCATTAATGGCAAGAGATCCTAGTGCTCTAGCATATGCTATAAAGCGATCATGTGAAAACAAGGCTAAGGTTGTGTCGCTAGATGAGAAGGAAAGTGGAGTGAGAGCAACATTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACTGGGGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGAACGGTAATGGCTGTTGATATGTCCTATCGCCTTGGTTGGATCGATGATTCTATTGTTAAGCGAGTCGGAGACATTTTAAAACAGGCCAAGTTACCGACTACACCTCCGGAAACCGTGACCGTGGAGATGTTCAAATCTGTGATGGCAGTTGATAAGAAGGTAGCAGATGGGTTGCTAAGGCTAATCCTTCTAAAGGGTCCACTAGGCAACTGTGTTTTCACAGGGGATTATGACAGAAAGGCCCTAGATGATACCCTTCATGCATTCTGTAAATCCTGA 1359 0.4614 MASTSTHFSLSLSAKQLATSTSAAAATRKPTHLFSPIQKPNLVSPHLLLRSSSNHPSQRAPVFLTSRICASSAQVMDPSAAKTEPGVPTIVDVDLGDRSYPIYIGSGLLDKPELLQRHVHGKRVLVVTNNTVAPLYLDKVIDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHSLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPSALAYAIKRSCENKAKVVSLDEKESGVRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQAKLPTTPPETVTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLHAFCKS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0406 452 Hamap 3-dehydroquinate synthase [aroB]. 88 450 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aev05g0406 452 Pfam 3-dehydroquinate synthase 156 414 IPR030960 -
Aev05g0406 452 TIGRFAM aroB: 3-dehydroquinate synthase 100 440 IPR016037 GO:0003856|GO:0005737|GO:0009073
Aev05g0406 452 SUPERFAMILY Dehydroquinate synthase-like 93 442 - -
Aev05g0406 452 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 87 448 - -
Aev05g0406 452 Gene3D - 262 452 - -
Aev05g0406 452 PANTHER 3-DEHYDROQUINATE SYNTHASE 87 448 - -
Aev05g0406 452 CDD DHQS 99 446 - -
Aev05g0406 452 Gene3D - 76 261 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0406 K01735 - gmx:100806628 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0406 05 2808733 2811923 Aev05g0406 05 2808733 2811923 ECH