Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0348 ATGGCGGTTCCACTCAGAATGAACAGCAACAACAACAAGCGCGGCGTGCTTACTCGTCTGAAAACCCTCATCAACACACACGCCCAGTTGCAGAGATTCTACTCTCCTACGCCGCCCAAAGGGGTGCTACAAGATCGGTTGTCCCCCAAAACGAACTCAGACTACTCGGCTGTGGAAGGGCGCCTTGAGGTCTCAAAATGGGAGTCTTTGGACGCAAGTAAGCTGGGCATAACTAGTTCTAGGATTTCACAGCCATCTCGGATTATCCTGAACTCTCTTCAGCGCAAAGGATTTAAGTCCTACTTGGTAGGTGGGTGTGTGAGAGATCTAATATTGAATAGAACTCCAAAAGATTTTGATGTGATCACCACAGCAGAGCTTACAGAGGTACGAAAGCAATTTTGTAAATTAGGACGTGCAGTAATTGTGGGACGGCGTTTTCCAGTATGCCTGGTTCATATAAAAGGTTCTGTAGTAGAGGTAACCAGTTTTAAGACTGAGGCACGGACTTCCAAAGGCAGTGACCAATTTCGACAAACTCTATTGCCCAAATTCAACAATAAATACGACTTAATTCGCTGCAAAGACTCCTTGCGCAGAGACTTCACAATTAATAGTTTATTTTATGACCCTTCTGCTAATATGATCTACGATTATGCCAACGGAATGGCTGATTTGAGGTCCTTGAAGCTAGAAACTGTGATCCCTGCTCAACTGTCCTTTAAAGAGGATCCTGGGAGAATTTTGCGTGGCTTCAGAATTGCTGCTCGTCTAGGTTTATCATTATCAAGGGATATTGAGGCTGCTATCTTGACTTATTCTTCACTAGTTAAGAGGTTTGATAAGAGTAAAATAATGATTGAATTGAATTATATGCTGTCTTATGGCGCTGCTGAACCATCTTTGCGCTTGCTCTGGAAATTCAACTTACTTGAATTTTTACTTCCTGTGCATGCAGCATATCTTGATGGACAAGCTAATAAAGAAGAAGATGTGGCATCCACTATGTTGATGAAACTATTCCTCCATCTGGATAATTTGGTTGGTTGTGACAGGCCTTCTGATTGCACTCTATGGGTTGGATTGCTAGCATTTCACCTGGCACTAATAAATAACCGTCAAGATGCCCTTGCGGTGTGGGCACTTGCTTCTGTTCTATATCATGGGGAGTGGGATGAAGGTGTTAAATTTGCTAAACAACGTGCGGAAATGTGTGTTAATTTTGCACCTGAAATAAGGAGGTCCAGTTTATGCAAATCAGATGAAAAAATTGCAGAGGCAGTCACTAATTTGGCATCTCTCGTGATGAACTCCATACCTGTTCTCGTTAAGGTATTTGTATCAAAGAAAACAGGGAGTCTAGCTTCCGAAATTTTCGAAGTGCTGGTCAATGATGTCCAATCTTACAGGAGTAAAAGAAGAAGTTCAAAGATAAATTATGAAATGCTCGGGAAGGGCAACCTCACGGAGACTAGATATGTTTTGGGCAAAATTGTTCTTGACACCATGACTAGTGGAATTGTTGAGGACGGGAAGGATTATGAGGCTGAAAGATGCCGTCCTAAGACTGAGGGCACCAAGGAAACTGGCCAGTTGCAACTTTCAGATAAAGTAAATCATCAATTGGTTGCAAGGAAACATAAGAGACAAGATCATTCGCCGCAAAATCCAGAATGTAAGCAAGAAAATATCAAGAAACTGAAGTTGGTTGCGAATGGACGTGTTTCAAAGCAGAAAAAGGACATTGGGGACCATAAATTGTTCGATGAGTTTGAGTACAAGGAAACAGGTGAAGAGCGCCCTGTGCGAGTTAAATTAAGTCAGAAGTTCGATCCATCTGTGACGAAGGACTCCGTGCCAAGAAAGAAAATACATCAAAGGAATCATCTGATAAAGGATAGGAGGAAAACTACCACTGTGAGTACAAGTTCTTCAGCCCATGCTAGACATTTGAAGAAGGTTGAGCACAACACTGGTACATCGCCGCAATCTACAGTATCTAAGAATCATCAGAAAGTAGCTGACAGGAACATAGATGCAAAAACAACAAATAAGTCAGATTTAAAGGAAGGAAAATCGCATTTATCACCCAACGAAGTCGTCAAGGATAAAGAAAGCAAGCTACAAGATAAAAATAAGCTAAGTCAGCGTTCACTCTCCAGCCTCTTCAAGTAA 2175 0.4198 MAVPLRMNSNNNKRGVLTRLKTLINTHAQLQRFYSPTPPKGVLQDRLSPKTNSDYSAVEGRLEVSKWESLDASKLGITSSRISQPSRIILNSLQRKGFKSYLVGGCVRDLILNRTPKDFDVITTAELTEVRKQFCKLGRAVIVGRRFPVCLVHIKGSVVEVTSFKTEARTSKGSDQFRQTLLPKFNNKYDLIRCKDSLRRDFTINSLFYDPSANMIYDYANGMADLRSLKLETVIPAQLSFKEDPGRILRGFRIAARLGLSLSRDIEAAILTYSSLVKRFDKSKIMIELNYMLSYGAAEPSLRLLWKFNLLEFLLPVHAAYLDGQANKEEDVASTMLMKLFLHLDNLVGCDRPSDCTLWVGLLAFHLALINNRQDALAVWALASVLYHGEWDEGVKFAKQRAEMCVNFAPEIRRSSLCKSDEKIAEAVTNLASLVMNSIPVLVKVFVSKKTGSLASEIFEVLVNDVQSYRSKRRSSKINYEMLGKGNLTETRYVLGKIVLDTMTSGIVEDGKDYEAERCRPKTEGTKETGQLQLSDKVNHQLVARKHKRQDHSPQNPECKQENIKKLKLVANGRVSKQKKDIGDHKLFDEFEYKETGEERPVRVKLSQKFDPSVTKDSVPRKKIHQRNHLIKDRRKTTTVSTSSSAHARHLKKVEHNTGTSPQSTVSKNHQKVADRNIDAKTTNKSDLKEGKSHLSPNEVVKDKESKLQDKNKLSQRSLSSLFK* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0348 724 Pfam Probable RNA and SrmB- binding site of polymerase A 259 321 IPR032828 -
Aev05g0348 724 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 13 724 - -
Aev05g0348 724 Gene3D - 233 465 - -
Aev05g0348 724 Pfam Poly A polymerase head domain 101 230 IPR002646 GO:0003723|GO:0006396|GO:0016779
Aev05g0348 724 SUPERFAMILY Nucleotidyltransferase 75 227 IPR043519 -
Aev05g0348 724 MobiDBLite consensus disorder prediction 672 712 - -
Aev05g0348 724 CDD NT_ClassII-CCAase 89 227 IPR002646 GO:0003723|GO:0006396|GO:0016779
Aev05g0348 724 MobiDBLite consensus disorder prediction 657 671 - -
Aev05g0348 724 SUPERFAMILY Poly A polymerase C-terminal region-like 231 368 - -
Aev05g0348 724 MobiDBLite consensus disorder prediction 632 724 - -
Aev05g0348 724 Gene3D Beta Polymerase, domain 2 82 232 IPR043519 -
Aev05g0348 724 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 13 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0348 Aev-Chr5 2488820 2493864 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0348 - - ccaj:109801320 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0348 05 2488820 2493864 Aev05g0348 05 2488820 2493864 ECH