Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0336 ATGGCCGAATCCGAAGCCTCATCGTACCCTCCCATCGAGCCCTCCAACTTCGATCTCATCGTCGTAGGCACCGGCCTGCCGGAATCCGTCATCGCCGCCGCAGCCTCCGCTGTCAAAAAGACCGTCCTCCACCTCGACCCGAACTCCTTCTACGGTAGCCACTATGCCTCCCTCTCCCTCCACGAACTCACCTCTCACCTCAATTCTAATTCCCTTCCCTCACCGCCACCACCATCCACTGCTACCACCGCCGACGCCGCATCCGGAGATTCAGATCACGCTGTCGTGGACCTCGTCCGCGAGCCTCTCTACTCCGACGTGGAGATCGAATCGCGCGGTTCCGAAGAAGAGATCGCGAAGCTTCGAGAAGATTCTAGAAAATTCAACCTCGATTTAGGAGGACCTAGGGCGCTGCTCAGCGCCGACAAGTGCATCGATCTGTTGCTGAAATCCAGCGCGGCGCAGTACCTGGAGTTCAAGGGCATCGACGCGAGCCTCGTGTATGATCCGAATGGCGGTGGTTTGGCAAACGTGCCGGATTCTCGCGGAGCGATCTTCAGGGACAAGAAGCTGTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTTGTGCAGAATCACCTTGGTGGCGGCGACGAGAATAGCGGTGAAGTTCAGAAGATTTCGGAGGAAGATTTGGATAGTCCGTTCGTTAGTTTCTTGGAGAAGATGCGGTTGCCGCCAAAGATAAAATCGATTCTTTTGTATGCTATCGCCATGGTAGATTATGACCAAGACAATAGTGAGCTTTGTAAAGATTTGCTTAAGACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCGGTTGGAAGGTTTCCCAATGCACCGGGGGCTTTGCTTTATCCTATTTATGGGGAAGGAGAACTACCACAAGCTTTTTGTCGCCGTGCTGCTGTGAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATGGATAAGGTTACTGGGTGTTATAAAGGTGTTAGATTAGCTTCGGGTCAGGATTTATATAGCCATCAGCTGATCCTGGACTCGTCATTCACGAACCCATCGCCATTGTCTTCGATTCCCGGAGATTTTCCCAGAGAAAGGCTCCAAACGCCGAGTCTGAGAGATATTAAAAGAATGGTGGCTAGGGGAATATGCATCACAAGGAGTTCCGTAAAGCCAGAAGTGTCAAATTGCTCAGTGGTGTATCCCCCTAGATCTTTATATCCTGAACAAGTGACGTCAGTCAGAGCTCTTCAAATAGGATCAAATCTTGCTGTTTGTCCAGCGGGCATCTTTATTTTATACTTGTCCACTTTGTGCAATGATGCCGATGAAGGAAAGAGGTTACTAAAAGCAGCCATGAATGCTCTCCTTACACCGGCTGTATCTGGAAATAATGACGATATTCCAATTGTTGCAAGTGAGAGTGAAGCCATAAAACCCATTGTGCTCTGGAGTGCATTTTATATTCAGAAACTGTTCTTGGGCAAATTTGACTCTATCAGTTCTGCTCCTACGCCAGATGGAAATCTAAACTACAATGACCTTTTAGATGCAACTGAGAAGCTATTCAGTCAAATGTACCCCGAAGAAGAATTCTTTCCGAAGACAACATCACCTGAAGAAGATAATACGGATGAAAATGGGGTCATTATGGAGAGCTAA 1698 0.4835 MAESEASSYPPIEPSNFDLIVVGTGLPESVIAAAASAVKKTVLHLDPNSFYGSHYASLSLHELTSHLNSNSLPSPPPPSTATTADAASGDSDHAVVDLVREPLYSDVEIESRGSEEEIAKLREDSRKFNLDLGGPRALLSADKCIDLLLKSSAAQYLEFKGIDASLVYDPNGGGLANVPDSRGAIFRDKKLSLKEKNQLMRFFKLVQNHLGGGDENSGEVQKISEEDLDSPFVSFLEKMRLPPKIKSILLYAIAMVDYDQDNSELCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLMDKVTGCYKGVRLASGQDLYSHQLILDSSFTNPSPLSSIPGDFPRERLQTPSLRDIKRMVARGICITRSSVKPEVSNCSVVYPPRSLYPEQVTSVRALQIGSNLAVCPAGIFILYLSTLCNDADEGKRLLKAAMNALLTPAVSGNNDDIPIVASESEAIKPIVLWSAFYIQKLFLGKFDSISSAPTPDGNLNYNDLLDATEKLFSQMYPEEEFFPKTTSPEEDNTDENGVIMES* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0336 565 MobiDBLite consensus disorder prediction 545 565 - -
Aev05g0336 565 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 13 553 - -
Aev05g0336 565 PRINTS Rab GDI/REP protein family signature 144 160 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 PRINTS Rab GDI/REP protein family signature 302 323 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 PRINTS Rab GDI/REP protein family signature 195 210 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 PRINTS Rab GDI/REP protein family signature 36 53 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 PRINTS Rab GDI/REP protein family signature 18 36 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 Pfam GDP dissociation inhibitor 16 71 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 Pfam GDP dissociation inhibitor 119 452 IPR018203 GO:0005092|GO:0007264
Aev05g0336 565 SUPERFAMILY FAD/NAD(P)-binding domain 14 367 IPR036188 -
Aev05g0336 565 Gene3D - 14 544 IPR036188 -
Aev05g0336 565 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 178 295 - -
Aev05g0336 565 MobiDBLite consensus disorder prediction 67 91 - -
Aev05g0336 565 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 102 504 - -
Aev05g0336 565 Coils Coil 104 124 - -
Aev05g0336 565 PIRSF Rab_ger_ger_transf_A_euk 105 564 IPR001738 GO:0005968|GO:0006886|GO:0018344
Aev05g0336 565 PIRSF Rab_ger_ger_transf_A_euk 1 120 IPR001738 GO:0005968|GO:0006886|GO:0018344
Aev05g0336 565 SUPERFAMILY FAD-linked reductases, C-terminal domain 388 502 - -
Aev05g0336 565 PANTHER RAB GDP-DISSOCIATION INHIBITOR 13 553 IPR018203 GO:0005092|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0336 Aev-Chr5 2421011 2424973 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0336 K23460 - gmx:100795946 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0336 05 2421011 2424973 Aev05g0336 05 2421011 2424973 ECH