Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0330 ATGGCGAGCATAAGGCCTTTGCCGGAATCTGTTCGCAGCTCGGTGCGTTCCGGAATTTTCTTGTTCGACTCTACGCGCGTCGTCGAGGAGCTTGTTTTCAATAGCCTCGATGCTGGCGCCACGAAGGTATCAGTGTTTGTTGATATCGGGAGCTGTTACGTTAAAGTAGTAGACGACGGAGGTGGAATACCTCGAGATGGACTTGAGCTGGTGGGACAAAGATATGCAACATCAAAATTTCTTAATTTGGATGACCTGAATGCCACAAGTAGAAACTTCGGTTTCCGGGGAGAAGCCTTAGCTTCCATTTCCGAACTCTCTTTGTTGGAAATTTTGACAAAAACTTATGGAAGACCCAATGGATACCAAAAAGTATTGAAGGGGTGCAAGTGTCTATATCTTGGTATTGATGATGATAGAAAGGAAGTTGGTACAACAGTTGTTGTCCGTGATTTATTTTACAACCAACCGGTTCGGAGGAAATACATGCAATCCAGCCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTCCAGCGGCTTGCACTTGTGCGCCCACATATTTCCTTCAAAGTTGTTGATGTTGAAAGAGAGGATGAGCTTTTCTGCACACAATCTGCTTCTTCTCCTCTGCCACTTTTAACCAGTGGCTTTGGGGAGGAGGTCTCAAGCTCTCTTCAAGCTTTGGAAGTTGAGAATGATATCATAAAGCTTTCTGGATATGTCTCCAGTCCATACAATGCTTTGAATATAAAGGGCTTGCAGTATGTCTATATTAACTCACAGTTCATTTGCAACGGCCCGATTCATAAGCTTTTGAGTCAAATGGCCATTAGCTTTGAGCATCTGAACTCAAGCAATACTGAGAATGCATTTCAAAACAAGAAGAGAAGTAGGTCTCAACCATGTCCAGCTTATATCTTGAATTTAAGTTGCCCCCGCTCTTTCTATGATTTGACCTTTGAGCCATCAAAAACTTATGTTCAATTCAAGGATTGGGCTCCTATACTGAATTTCATTGAGAAGGCCATCAAAAAGTTCTGGGAAGAAAGCATTGCTTGTGAGTCCTTCAATCAAGCCATTTACGTGGCGCAAGAAGATAAGGTTCAACAAGATCAACTGTGGAAAGCAGATGTCAATATCCTTTCAACAGAAGCTGATAAATCAAAATTTGGAAACCTAACTAGTAAGGATTGCCTGGAAGTCTCCTTCACCACTTCAGACAAGCTAACTGAAGATGAATATCTTCAATCCAATGGGGGAAATGTTAGAACCTCTATCGGTTATTTGCATCAAGGAACTGAGATATTCAAGGAGAAACAACACTTTCCTTGTCAGACTGGTTTTTCTGGCAATTTACTGGATGGTTCGTATGCCAAAAGCATGTCCACTGTGGTGAGAAAGCATAACACTTTATCAATGTATTATGACAATGGTCAATCACTTGGAGGTTACTTCTTGGATAGTGAATTTCCTGCTGCAGAAAGTTTACGTGATAATGTTCCTTTTGATGCACCTAGCTCTTCACATGGAAGAAAATTCCGTAAAGTAGATGCTGATATGATCAATGAATTTGTTGAAGGTGATTTACTATATGACAATCATGGATTTTGTTATGATGTAGAGGTTGATGAGGATTTTCAAAAGCCTTTTCTGAAGAGATGCTCTATACGAGAAAGTATACTGCATGAGAAGGGTTTATATCTAAATGATGAACATGAACTCCAAACTGATAGCTTTTGGAGCAAACAGAATCTGGGGAAGGATGGTGGAAGTGTAAAGGATTTATGTGCCCAAAATTTTCAAGAAGTTGTGAGGAAATTCAAGATGTCCAGAGGTTCTGAATTTTTCTTTAAACCAGTGGCTGAAGATCTTCCATATTCTCCCTACTCAGCAACACAAACAATAAACTCAGGGTCTGATAATCTGTTATTAAATTCTGAATGGCATCCTGTCTACCGAGAACCCTCATCAAAAGCCCCTGCTTGGGGTGTCGATCATACAAGTGATATTAATGATCTTGGAGGTGTATGCCATGTTTCTAGATACAATAAAAGGGTCCTTCATACAGAAATTCTTGATGATGAAGAAAATGAAGGTGACTTCGGCTACAATATATCAAGGAATGCCAATGATCATTACCATACCTCAAGTTTTGTTGATGACGGATTTGAGTTTAATCATGCTGTTTATTCTGAGAAAATATTTGGCACAATAGTTGACTGGCAAGATTGTCATTACAAACATTCTACGAAAAGGTCAGATGTTTCAACTGAGGAGTCTGAGATGCTGTTGCCTGATACACACATTGAAAAAAGCAAGAGACCTAACAATATCAAAGGTTCAGAGGATCATTTTGGACATCCAGCTTCGGAGAATAATCAGAAACGATCTGAAAGAAGCTTTTCAGCTCCACCATTTCAGAAACATAAAAGGAGGTTTATTTCCTTAAATCAGCCTTCAGAAATGGAAGCCAAAAGACCTACTGGCCAAGCCTCCAACATTGCTTTCAATCATCGAGAAGCTGGTGATTTTAAATGCACTCAACAATCTCCTGGTGATCTTCACCCAACCACTGAAGATAACTTATCGAATGAATTCAAAACTAATGTGAAACAGAGATCAGATGTTCTGGGAGATACACATGTTCATGACACCAAAGCAAGTGATGGGTTTTGTACTCTCAACATTCAAAACAATGCTCCTTTCAGAGAATTGTTCTCGAGGGAAGTGAAACATTCCATTGATCAAAGGACCAAATGGAGGGACTGCTCACCACAAATTCCAAAAAATGATAAGCCGGTTGATGTTCAAAGTCAGAACAATATACTTGATATCTCTTCTGGATTCTTGCATCTTGCTGGAGATTCATTGATACCGGAAACAATCAGTAAGAAATGCCTCGAGGATGCTAAAGTTCTCCATCAGGTGGATAAGAAATTCATTCCAGTTGTTGCTGGTGGAACCCTTGCTGTCATTGACCAGCATGCTGCAGATGAAAGAATTAGACTGGAAGAATTGCGTCAAAAGGTATTATCTGGAGAAGCAAAAGAAATAACCTACCTGGATGCTGAACAGGAACTGGTGCTGCCAGAGATTGGTTATCAACTACTACATAGTTATAGCAAACAGGTTAAAGATTGGGGCTGGATCTGCAATATTCATGCTCAAAATTCTGAATCTTTTAAAAGGAATTTGGATATTCTCAACAGACAACCAATGGCCGTCACACTTATTGCAGTACCTTGTGTTTTAGGTGTCAACTTAAATGATGATGATCTCTTAGAATTTCTTCAGCAGCTTGCTGACACTGATGGATCATCAACAATGCCACCCTCTGTAGTAAGAGTCCTGAATTTGAAAGCATGCAGAGGTGCTATCATGTTTGGTGATTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAGGAGCTAAAGCATACATCACTTTGTTTCCAATGTGCTCATGGGCGACCAACAACTGTTCCTCTTGTAAACTTGGAATCACTGCATGATCAGATAGCCAAGCTTGCACTGATGAATGGCTCTTCAGAAGATGATGATGATGATAAGTGGCATGGATTACATAGACATCAAATATGCATTCAACGTGCAGCGCACCGTCTATCTTCTGCTAGAGGAGTCTGA 3648 0.4021 MASIRPLPESVRSSVRSGIFLFDSTRVVEELVFNSLDAGATKVSVFVDIGSCYVKVVDDGGGIPRDGLELVGQRYATSKFLNLDDLNATSRNFGFRGEALASISELSLLEILTKTYGRPNGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKKCVQRLALVRPHISFKVVDVEREDELFCTQSASSPLPLLTSGFGEEVSSSLQALEVENDIIKLSGYVSSPYNALNIKGLQYVYINSQFICNGPIHKLLSQMAISFEHLNSSNTENAFQNKKRSRSQPCPAYILNLSCPRSFYDLTFEPSKTYVQFKDWAPILNFIEKAIKKFWEESIACESFNQAIYVAQEDKVQQDQLWKADVNILSTEADKSKFGNLTSKDCLEVSFTTSDKLTEDEYLQSNGGNVRTSIGYLHQGTEIFKEKQHFPCQTGFSGNLLDGSYAKSMSTVVRKHNTLSMYYDNGQSLGGYFLDSEFPAAESLRDNVPFDAPSSSHGRKFRKVDADMINEFVEGDLLYDNHGFCYDVEVDEDFQKPFLKRCSIRESILHEKGLYLNDEHELQTDSFWSKQNLGKDGGSVKDLCAQNFQEVVRKFKMSRGSEFFFKPVAEDLPYSPYSATQTINSGSDNLLLNSEWHPVYREPSSKAPAWGVDHTSDINDLGGVCHVSRYNKRVLHTEILDDEENEGDFGYNISRNANDHYHTSSFVDDGFEFNHAVYSEKIFGTIVDWQDCHYKHSTKRSDVSTEESEMLLPDTHIEKSKRPNNIKGSEDHFGHPASENNQKRSERSFSAPPFQKHKRRFISLNQPSEMEAKRPTGQASNIAFNHREAGDFKCTQQSPGDLHPTTEDNLSNEFKTNVKQRSDVLGDTHVHDTKASDGFCTLNIQNNAPFRELFSREVKHSIDQRTKWRDCSPQIPKNDKPVDVQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRQKVLSGEAKEITYLDAEQELVLPEIGYQLLHSYSKQVKDWGWICNIHAQNSESFKRNLDILNRQPMAVTLIAVPCVLGVNLNDDDLLEFLQQLADTDGSSTMPPSVVRVLNLKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLESLHDQIAKLALMNGSSEDDDDDKWHGLHRHQICIQRAAHRLSSARGV* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0330 1215 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Aev05g0330 1215 Pfam DNA mismatch repair protein, C-terminal domain 217 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Aev05g0330 1215 MobiDBLite consensus disorder prediction 750 795 - -
Aev05g0330 1215 Gene3D - 1017 1128 IPR042121 -
Aev05g0330 1215 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 - -
Aev05g0330 1215 Gene3D - 976 1164 IPR042120 -
Aev05g0330 1215 SUPERFAMILY Ribosomal protein S5 domain 2-like 199 349 IPR020568 -
Aev05g0330 1215 SUPERFAMILY DNA mismatch repair protein MutL 971 1164 IPR037198 -
Aev05g0330 1215 MobiDBLite consensus disorder prediction 750 813 - -
Aev05g0330 1215 Gene3D - 215 353 IPR014721 -
Aev05g0330 1215 TIGRFAM mutl: DNA mismatch repair protein MutL 3 328 IPR002099 GO:0005524|GO:0006298|GO:0030983
Aev05g0330 1215 Gene3D - 2 208 IPR036890 -
Aev05g0330 1215 SMART MutL_C_2 973 1133 IPR014790 GO:0005524|GO:0006298
Aev05g0330 1215 Pfam MutL C terminal dimerisation domain 972 1133 IPR014790 GO:0005524|GO:0006298
Aev05g0330 1215 CDD HATPase_MutL-MLH-PMS-like 11 198 - -
Aev05g0330 1215 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 25 201 IPR036890 -
Aev05g0330 1215 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1170 IPR028830 GO:0006298
Aev05g0330 1215 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1170 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Aev05g0330 1215 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0330 K08739 - gmx:100788019 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0330 05 2380606 2388934 Aev05g0330 05 2380606 2388934 ECH