Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0276 ATGGCGAGTGAATCCGCCGTGAAAGGGCCTCCGACTCCGCCGTCGTCTTCATCGTCGAATCCCGCGGATTCCTACATTGGCTGCTTCATAAGCTTGGTTTCGAGGTGCGAGATTCGTTACGAGGGCGTTCTGTACTTTCTCAACGTCCACGATTCTACCATCGGCTTGAAGGACGTTAGATCCTACGGAACAGAGGGTAGAAGAAAAGATGGTCCGCAAGTTCCTCCAAGTGATAAGGTTTATGAATATATTCTTTTCCGAGGAAATGACATTAAGAATTTGCAGATCAAGTCTTCCCCGCCGGCATCTACCAAATCAGAAGAGCAGACATTTAGCGACCCAGCTATTATTCAGTCACAATATGATGGGATGCTAAGTTCTCCAGTGGCTTCCTCAGTTGGTGGGAGAAGTTTGACAGAACCAATTCAATGGCAAGATACTCCTGCTGTCAGCAGTAAAGCCCTTCCTGTTGGATTGCCTTCTCATCAATCTGCAACTCAGCTGGGCCCTCCAAATCAATCTGCCGGTACTCAGGTTGCTGGCCACCCATCTTTTTCTACCCCAAAGTATTGGCAAGGGGACAGTGGAATATCAAGCATCAACTCTAATTCTCTGCTAAAACCTAGTTCTCTTCAATCCCCGTCAATATCACCCTTGCCTTTTCAGAATTGGATGCAAACGCCAGAAACTCAGGCACCTGCAAAAGTGGGATGGACATCTTTATCAGAGTGTGGTCTACCTGTATCTTCTGCTGCTGCTTCTTCTCTTGTAGATCTGGCTCGTTCACCTTCTCATACCTCTTTACAAATTTCTGATTCGCTTGATGCTCCATCCCTCTTTTCTGCTAAGACACTTATGCCATATTCTACATCCATGACGTTTGATGGATCTAACATGCCTTCTTTTGCTTCACCTCTCCAAGACATAAATTCTATTATTGTTGGTCAAGTATCTGAAAAGATTTCTCCTGACCCGAGGTCAATTTATCCTGGGCATTCTGTCCACCATCCCACTTCTTCATTTGTAGGTTCGACTTCAGGTGCATTTCCAGCACCTCCATCATTGTTAACTCCAGATCAATTTGCCCATCCGGAAGAACATTTTTCTCCTTTTACACAGAACTTGATCCCTAAAGGGAATGATATGGGCTCTCTGATTCCAGCATCCTCGGGTTCCTCTGTATTGGTGCCTTCTCCAGCATCTCAAGCACCATTACTCCCACTACCTACTTTGGTGCAAAAGCCTCGGTCAGCAGCTTCACAGTTCACTGAAGAGTTTGATTTTGAGGCCATGAATGAAAAGTTCAACAAGGATGAAGTATGGGGTTCACTGGGAAAGGCAACTACACAAATAGAGGGAGTGGATGATAATGCTTCTTCTATCAGTTTGGGTGAGAGAGAAATTCATGGAGCGGTACCAAATCCTAAGTCTGCATACAAGAAAGATGACTTTTTCGACACAATTTCCTGTAACTCTATGACTCGTGGAAGGGGTGGACGTATGTCTGAGAGGATGAAACTGGACACTGAGACATTTGGCAATTTCCAACAGAGGCACAATGTTGGTTATGGTGGCTATGGTCCTGGACGGGGTGCGAATTTCAGGGGCTCACATAATTGGGGAAGAGGTTATGGTTATGGTGGGAGAGGGCGTGGACCGCACTTTCATTTCTAG 1674 0.4582 MASESAVKGPPTPPSSSSSNPADSYIGCFISLVSRCEIRYEGVLYFLNVHDSTIGLKDVRSYGTEGRRKDGPQVPPSDKVYEYILFRGNDIKNLQIKSSPPASTKSEEQTFSDPAIIQSQYDGMLSSPVASSVGGRSLTEPIQWQDTPAVSSKALPVGLPSHQSATQLGPPNQSAGTQVAGHPSFSTPKYWQGDSGISSINSNSLLKPSSLQSPSISPLPFQNWMQTPETQAPAKVGWTSLSECGLPVSSAAASSLVDLARSPSHTSLQISDSLDAPSLFSAKTLMPYSTSMTFDGSNMPSFASPLQDINSIIVGQVSEKISPDPRSIYPGHSVHHPTSSFVGSTSGAFPAPPSLLTPDQFAHPEEHFSPFTQNLIPKGNDMGSLIPASSGSSVLVPSPASQAPLLPLPTLVQKPRSAASQFTEEFDFEAMNEKFNKDEVWGSLGKATTQIEGVDDNASSISLGEREIHGAVPNPKSAYKKDDFFDTISCNSMTRGRGGRMSERMKLDTETFGNFQQRHNVGYGGYGPGRGANFRGSHNWGRGYGYGGRGRGPHFHF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0276 557 ProSiteProfiles DFDF domain profile. 414 450 IPR025762 -
Aev05g0276 557 MobiDBLite consensus disorder prediction 157 186 - -
Aev05g0276 557 SMART LSM14_2 19 121 IPR025609 -
Aev05g0276 557 Pfam Scd6-like Sm domain 25 98 IPR025609 -
Aev05g0276 557 PANTHER SCD6 PROTEIN-RELATED 17 550 - -
Aev05g0276 557 Pfam FDF domain 421 514 IPR019050 -
Aev05g0276 557 ProSiteProfiles FFD box profile. 477 492 IPR025761 -
Aev05g0276 557 SMART FDF_2 420 516 IPR019050 -
Aev05g0276 557 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g0276 557 MobiDBLite consensus disorder prediction 153 186 - -
Aev05g0276 557 CDD LSm14_N 22 96 IPR025609 -
Aev05g0276 557 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 17 550 - -
Aev05g0276 557 Gene3D - 16 100 - -
Aev05g0276 557 SUPERFAMILY Sm-like ribonucleoproteins 24 100 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0276 Aev-Chr5 2009716 2014552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0276 K18749 - gmx:102669894 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0276 05 2009716 2014552 Aev05g0276 05 2009716 2014552 ECH