Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0262 ATGCAGCTTTTGTTGCTAGCATTAATGGGTTTGCAAAGGTTTGGGCGTCCCAAGAATGGTTGTGAGCAGAGTTCAAACCTGTATGTGGCAAATTGTGGACCTGCTGTGGGGCTATCTCATGATGACATTGCCTCTGTGTTCTGCAAATTTGGTGAGCTTAAGGGTGTTTATGCAGCTGATGAGAGTGGGACACGTGTCATTGTGTCATTCTCTCAAGAGGGCTCTGCAGAAGCTGCATTCAAGGCATTAAATGGATCACCTTGTCCTGAACTTGGAGGCAGATCCTTGCATATCCGTTATTCAGTTCTTCAGCCAACTCCACAGGGTCAAGTGAGTGACTTGGTTCCTGTATCTCTTAATGCATCAGATCTGAGTATCCCAGGCATTTACTTAGTGCTTGACTTCATCAGTGCTAAAGAAGAAGAGGAGTTGCTGCGAGCTGTTGACTGCCGGCCTTGGAACAGACTTTCCAAAAGAAGGGTTCAACACTATGGTTACGAGTTTTGTTATGATACTAGGAATGTTAATACAAGACATTGCCTAGGTGGACTTCCATCATTTGTGTCTCCAATACTTGAAAGAATATCATCATGTCCAACTTTCAAGAATGCTGAACATATTGTTTTGGACCAACTTACTGTAAATGAGTACCCTCCTGGAGTGGGATTGTCCCCTCATATAGATACCCACTCAGCATTCGAAGATTTGATTTTCAGCCTTTCATTATCAGGGCCTTGTATAATGGAGTTCAGGAAATATGAAAATGGTGGTTGGCTTCCTAGAGTTTGTTCAAGTGCTGATACAAAAATAGGGAACACAGAAGAAGATGATTCAAATTTTTTAAGGAGAACTATATATCTTCCCCCTCGATCTTTGCTACTCATGTCTGGTGAAGCACGTTATGCATGGCACCATTATATTCCACACCACAAGATTGACAAAGTGAATGACAGAGTCATCAAAAGAGCATCGAGAAGGGTATCTTTCACATTTCGTAAGATTGTAACACCACGAGGAATACATTTTGTATGCCCATTTTTCACCATGAATGTTGAAGTTATATTAAGGGATATGTCGCTTCCTGTCATCCAAGGTTTTTCTTTACTGTCTAAAATTGTCTTGTTAAACACACCCTTTGTCTGCACCAGGTTAGAGCAGGCCCGTGCAAATGTGAATTCCCTCAGTATTGTGACTCCCAAAGATAAGGTTTCACTGAGGAGGCAAGGAGAAAGCTTCAAATCTCTGTGTCTGGGAGTTGCTAACCTGAGTGAGGTTATCATCTTTGATTTGATGTAA 1296 0.419 MQLLLLALMGLQRFGRPKNGCEQSSNLYVANCGPAVGLSHDDIASVFCKFGELKGVYAADESGTRVIVSFSQEGSAEAAFKALNGSPCPELGGRSLHIRYSVLQPTPQGQVSDLVPVSLNASDLSIPGIYLVLDFISAKEEEELLRAVDCRPWNRLSKRRVQHYGYEFCYDTRNVNTRHCLGGLPSFVSPILERISSCPTFKNAEHIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRKYENGGWLPRVCSSADTKIGNTEEDDSNFLRRTIYLPPRSLLLMSGEARYAWHHYIPHHKIDKVNDRVIKRASRRVSFTFRKIVTPRGIHFVCPFFTMNVEVILRDMSLPVIQGFSLLSKIVLLNTPFVCTRLEQARANVNSLSIVTPKDKVSLRRQGESFKSLCLGVANLSEVIIFDLM* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0262 431 Pfam 2OG-Fe(II) oxygenase superfamily 170 332 IPR027450 -
Aev05g0262 431 Gene3D - 120 338 IPR037151 -
Aev05g0262 431 PANTHER UNCHARACTERIZED 22 335 - -
Aev05g0262 431 Gene3D - 15 113 IPR012677 -
Aev05g0262 431 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 103 IPR000504 GO:0003723
Aev05g0262 431 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 335 IPR005123 -
Aev05g0262 431 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 22 335 - -
Aev05g0262 431 SUPERFAMILY Clavaminate synthase-like 123 334 - -
Aev05g0262 431 SMART rrm1_1 26 99 IPR000504 GO:0003723
Aev05g0262 431 SUPERFAMILY RNA-binding domain, RBD 20 108 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0262 K10770 - gmx:100777529 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0262 05 1909798 1912888 Aev05g0262 05 1909798 1912888 ECH