Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0182 ATGACTGGGACAATTGTCCTTAGCCAAACCCATTTTTTGCCACTGCCAAATAATTCACCACCACCCCAAAACTCTGAATTGAATGCTAAATTCAATGATAGTGGATGGTTGTCTCTACTTAAGAGATGCAAGAGCATGGAAGAATTTAAGCAAGTTCATGCCCAAATTGTGAAATTAGGTCTTTTCTGTGACCCTTTTTGTGGGAGCAATCTTGTTGCCACTTGTGCTCTAGCAAAATGGGGTAGTATGGAGTATGCTTGCTCTATCTTCAGGCAAATTGAGGAACCTGGTAGCTTTGAGTATAACATTATGATTAGAGGGAATGTTAATAGAATGAATCTAGAAGAAGCTTTAGTACTTTATATTGAGATGCTTGAAGGGGGAATTGAACCTGACAACTTCACATACCCGTCTGTTCTCAAGGCGTGTTCTCTATTAGGCGCTGTTAAAGAAGGAATTAAGATTCATGGGCATATTTTTAAGGCAGGTCTTGAAGGTGATGTGTTTGTGCAGAATAGCTTGATCAGCATGTATGGGAAATGTGGTAGAGTAAAGCATGCTTGTGATGTGTTTGAGAAAATGGATGAGAGAAGTGTGGCTTCTTGGAGTGCTATAATTGGAGCTCATGCTAGTGTGGAAATGTGGCATGAATGCTTGATGCTTTTCGGGGACATGATCGGTGAAGGGCAGTGTAGGGCGGAAGAGAGCACCTTAGTTAGTGTGCTCTCTGCTTGTACCCACTTGGGGTCTTCTAATTTTGGAAGGTCCATACATGGGTTCTTGCTGAGGAACATTAGTGAACTCAATGTCATTGTGAAAACCTCATTGATTGATATGTATGTCAAGTGCGGGTGCATCGAGAAAGGGCTTCGTGTATTCCAAAACATGGCTGAGAAGAATAGACATTCCTACACCGTAATGATCTCCGGGCTTGCTGTTCATGGACGCGGTAGGGAAGCTCTAAGAGTTTTCTCAGAAATGCTGGAAGAAGGTTTGACACCAGATGATATTGTGTATGTGGGTGTCTTGAGTGCTTGCAGCCATGCTGGCCTTGTCGATGAGGGCCTAGAGTGTTTCGACCGGATGCGATTTGAGCATAAGATTGAACCAACAGTTCAACATTATGGTTGCATGGTGGACCTCATGGGAAGAGCCGGGATGCTCAGGGAAGCCTATGAACTCATAAGAAGCATGCCGATTAAGCCTAATGATGTGGTCTGGAGGAGCCTTCTGAGTGCTTGTAAAGTTCACCATAACTTGGAACTCGGCGAGATTGCAGCAAAATATGTTTTCATGGTGAATCCAAACAACCCTGGCGACTACTTGGTGCTAGCGAATATGTACGCACAAGCTCAAAAGTGGGATGATGTGGCCAGGATCAGAACAGAAATGGTCGAAAAAGGATTGGCACAAACGCCTGGGTTCAGCCTGGTCGAAGCAAAGAGGAAGGTGTACAAGTTTGTTTCACAGGACAAGTCTCAACCCGAATTCGGCTTCATCTACAACGCGATCCACCAAATGGAGTGGCAGCTGAAATTCGAAGGCTACATACCGGACACATCACAGGTGTTGCTTGATGTGGAAGAAGAAGAAAAGAGGGAGAGACTGAACTTGCAGCCAGTAAGAGACACTAGAGAGAAGCAGACACAGCTATGGAAAGATCTCATTATAGATTATTGTAGAACACAGAAGGTGTTTGTAATTGGGCTTGAAGAAGAATTTCCTCTGTTTTCAAACCCTGTAATTGAAAGGTCTCTTACTCATGAAGCTCAACAAGCATTTCTTTCAGCCTTAGTAGCTGAAGGGCGTGCAGAATGGATGGATAAAGGACACAAGAAATGTCTTATACTCTGGCATCGAATTCAAGATTGGGCTGAGATTTTAGTACAATTTGCGAGAGATAATGGGCTGGAAGATGGTGTTGTGACTATAGAAGAAATACGCTTTGGGACTGAATCTCAAGGAACAGAGCTTCAAGGGATAGACCGAACTATTTTGAATCGAGCTTTGAAACTATTAGAGCAGAAGGGGAAGCTCGTTGTCTTTAAAGGAACTTCAACTGATGATGAAGGAGTTAAGTTCTCTCTATAA 2091 0.4333 MTGTIVLSQTHFLPLPNNSPPPQNSELNAKFNDSGWLSLLKRCKSMEEFKQVHAQIVKLGLFCDPFCGSNLVATCALAKWGSMEYACSIFRQIEEPGSFEYNIMIRGNVNRMNLEEALVLYIEMLEGGIEPDNFTYPSVLKACSLLGAVKEGIKIHGHIFKAGLEGDVFVQNSLISMYGKCGRVKHACDVFEKMDERSVASWSAIIGAHASVEMWHECLMLFGDMIGEGQCRAEESTLVSVLSACTHLGSSNFGRSIHGFLLRNISELNVIVKTSLIDMYVKCGCIEKGLRVFQNMAEKNRHSYTVMISGLAVHGRGREALRVFSEMLEEGLTPDDIVYVGVLSACSHAGLVDEGLECFDRMRFEHKIEPTVQHYGCMVDLMGRAGMLREAYELIRSMPIKPNDVVWRSLLSACKVHHNLELGEIAAKYVFMVNPNNPGDYLVLANMYAQAQKWDDVARIRTEMVEKGLAQTPGFSLVEAKRKVYKFVSQDKSQPEFGFIYNAIHQMEWQLKFEGYIPDTSQVLLDVEEEEKRERLNLQPVRDTREKQTQLWKDLIIDYCRTQKVFVIGLEEEFPLFSNPVIERSLTHEAQQAFLSALVAEGRAEWMDKGHKKCLILWHRIQDWAEILVQFARDNGLEDGVVTIEEIRFGTESQGTELQGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSL* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0182 696 Pfam E motif 417 479 IPR046848 -
Aev05g0182 696 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Aev05g0182 696 Pfam PPR repeat family 300 347 IPR002885 -
Aev05g0182 696 Pfam PPR repeat family 97 143 IPR002885 -
Aev05g0182 696 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 4 537 - -
Aev05g0182 696 Gene3D Tetratricopeptide repeat domain 24 148 IPR011990 GO:0005515
Aev05g0182 696 Gene3D Tetratricopeptide repeat domain 149 253 IPR011990 GO:0005515
Aev05g0182 696 SUPERFAMILY "Winged helix" DNA-binding domain 538 624 IPR036390 -
Aev05g0182 696 Gene3D - 536 617 IPR014041 -
Aev05g0182 696 Pfam PPR repeat 375 398 IPR002885 -
Aev05g0182 696 Pfam PPR repeat 201 229 IPR002885 -
Aev05g0182 696 Pfam PPR repeat 172 198 IPR002885 -
Aev05g0182 696 Pfam ESCRT-II complex subunit 538 662 IPR008570 GO:0000814|GO:0071985
Aev05g0182 696 TIGRFAM PPR: pentatricopeptide repeat domain 170 199 IPR002885 -
Aev05g0182 696 TIGRFAM PPR: pentatricopeptide repeat domain 274 299 IPR002885 -
Aev05g0182 696 TIGRFAM PPR: pentatricopeptide repeat domain 338 371 IPR002885 -
Aev05g0182 696 TIGRFAM PPR: pentatricopeptide repeat domain 302 335 IPR002885 -
Aev05g0182 696 TIGRFAM PPR: pentatricopeptide repeat domain 101 132 IPR002885 -
Aev05g0182 696 Gene3D Tetratricopeptide repeat domain 273 494 IPR011990 GO:0005515
Aev05g0182 696 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 300 334 IPR002885 -
Aev05g0182 696 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 97 131 IPR002885 -
Aev05g0182 696 SUPERFAMILY "Winged helix" DNA-binding domain 620 694 IPR036390 -
Aev05g0182 696 Gene3D - 618 695 IPR036388 -
Aev05g0182 696 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 4 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0182 Aev-Chr5 1410336 1414852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0182 38 524 Glycoside Hydrolase AT3G49170 36.105 2.77e-100 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0182 - - gmx:100795944 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0182 05 1410336 1414852 Aev05g0182 05 1410336 1414852 ECH