Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0175 ATGGATCATCAGAGCTGCTTACGTTGTTTGGGGACTAGTACTATACCCAAAAAACACAATTTTCTATTATCACCTATTTTTTGTGCTCTGCTGCTTCTGTTATTCTTCTTCAGTTCCGCAAACGCAGCGTTCGACTTAGCCACAATACCTTTCAACGATGCCTATTCTCCTCTCTTCGGAGATTCCAACCTCGTTCGATCCTCCGACGGCAACGGCGTTCGCCTCCTCCTCGATCGCTTCACAGGTTCGGGTTTTATTTCATCCAGTATGTACCAGTATGGATTCTTCAGTGCCAACATCAAATTGCCATCCAATTATACCGCTGGTATATGCGTCGCCTTTTATACATCAAACGGTGACGTGTTCGAGAAAACCCATGATGAGCTGGACTTTGAGTTCCTAGGGAACATAGCTGGCAAACCATGGCGGTTTCAGACTAACTTGTATGGTAACGGCAGCACCCACCGTGGCCGTGAGGAACGCTATCGTCTATGGTTCGACCCTACCAAGGAGTACCATAGGTACAGCATCCTTTGGACTGCCAAGAATGTCATATTTTACATTGATGAAGTTCCAATTAGAGAGGTGTTAAGGAGTAAGGAAATGGGTGCTGATTTCCCATCTAAGCCCATGTCATTATATTCAACCATATGGGATGCATCAAATTGGGCCACATCTGGTGGAAGATTCAAAGTGAACTATAAGTATGCACCTTTTGCTGCTGAATTCAAAGACTTAGTCCTCAAGGGTTGCTCTGTTGATCCAATTCAAGAGGTCTCCGGCGCCGAGGTATGCTCGGAACAACACGCCGATCTTGAGGAGCAGGATTATGCCGCCATGACCCTGATGCGCCGCCTAGCCATGCGTAGGTTCCGGCAACGCTACATGTACTATTCTTATTGCTATGATACATTGAGATATCCGGTGCCACCACCGGAATGTGTTATTATACCGTCGGAAAAACAGAGGTTTAAGGAGACTGGGAGGTTGAGATTTGGTGGTAGCCACCGCCGGCAGTCTAGGCGGCGGGGCCGGACGACAACTCTGATGGAAGATCCTGATCAGATTGATATGTGA 1077 0.4726 MDHQSCLRCLGTSTIPKKHNFLLSPIFCALLLLLFFFSSANAAFDLATIPFNDAYSPLFGDSNLVRSSDGNGVRLLLDRFTGSGFISSSMYQYGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKEYHRYSILWTAKNVIFYIDEVPIREVLRSKEMGADFPSKPMSLYSTIWDASNWATSGGRFKVNYKYAPFAAEFKDLVLKGCSVDPIQEVSGAEVCSEQHADLEEQDYAAMTLMRRLAMRRFRQRYMYYSYCYDTLRYPVPPPECVIIPSEKQRFKETGRLRFGGSHRRQSRRRGRTTTLMEDPDQIDM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0175 358 CDD GH16_XET 47 314 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev05g0175 358 ProSitePatterns Glycosyl hydrolases family 16 active sites. 128 138 IPR008263 GO:0004553|GO:0005975
Aev05g0175 358 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 316 IPR013320 -
Aev05g0175 358 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 42 243 IPR000757 GO:0004553|GO:0005975
Aev05g0175 358 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 32 337 - -
Aev05g0175 358 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 277 314 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aev05g0175 358 Pfam Glycosyl hydrolases family 16 54 235 IPR000757 GO:0004553|GO:0005975
Aev05g0175 358 Gene3D - 37 314 - -
Aev05g0175 358 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 32 337 IPR044791 GO:0004553
Aev05g0175 358 PIRSF EndGlu_transf 17 319 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev05g0175 358 MobiDBLite consensus disorder prediction 332 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0175 Aev-Chr5 1366394 1369443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0175 30 336 Glycoside Hydrolase AT1G32170 70.358 1.29e-166 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0175 K08235 - gmx:100786236 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0175 05 1366394 1369443 Aev05g0175 05 1366394 1369443 ECH