Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0155 ATGTCGGCGATAAAAACTGTTAAGGTCAGTAATGTTTCCTTGGGCGCAACTGATCGAGACATAAAGGAGTTCTTTTCTTTTTCTGGTGACATTGAATATGTTGAGCTACGGAGTCATGATGAACGGTCTCAAATTGCTTATGTTACCTTCAAGGATTCTCAGGGTGCTGAGACGGCAGTACTGCTATCGGGAGCAACTATTGTTGATCTTTCAGTTACAATAACTCCAGATCCAGATTACCAGCTTCCCCCAGCTGCCTTGGCATCATCTGCGAAAGAGAGTCAAGCTCCTGGTGGTGCTGATTCTGCCTTACGGAAGGCAGAGGATGTGGTCTCCAGCATGCTAGCCAAGGGCTTCATCTTAGGGAAGGATGCTGTCAATAAAGCAAAGACTTTTGATGAGAAGCACCAGTTATCCTCAACTGCCTCTGCAAAGGTTGCATCTCTTGACCAAAAAATCGGACTTAGCGAGAAAATAAGTGCTGGTGCTACGGTTGTGAGCGATAGAGTTCGAGAAGTTGATCAAAAGTTTCAGGTCTCAGAGAAGACCAAATCAGCATTTGCAGCTGCAGAGCAGAAAGTCAGTACTGCCGGTTCCGCCTTGATGAAGAATCGCTACATACTCACTGGGGCCTCCTGGGTGACAGGTGCATTCAACAAGGTTTCTAAGGCAGCCGGGGAAGTAGGGCAGAAGACGAAGGAGAAAATGGAGAGTGCAGAAGAGCAACAAAAGCGAAAAATGGAAGATCAGTATGCACAGGTCCTTTCTGAGTCTCCAACAAAAGCATCAGCACCGAGTGAGCAGCAACAACAGTCTTCTAAGCCTGCTCCTGCTCAGGGTTTGATCCTGTGA 852 0.4707 MSAIKTVKVSNVSLGATDRDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDSQGAETAVLLSGATIVDLSVTITPDPDYQLPPAALASSAKESQAPGGADSALRKAEDVVSSMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASLDQKIGLSEKISAGATVVSDRVREVDQKFQVSEKTKSAFAAAEQKVSTAGSALMKNRYILTGASWVTGAFNKVSKAAGEVGQKTKEKMESAEEQQKRKMEDQYAQVLSESPTKASAPSEQQQQSSKPAPAQGLIL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0155 283 MobiDBLite consensus disorder prediction 225 283 - -
Aev05g0155 283 SMART rrm1_1 6 75 IPR000504 GO:0003723
Aev05g0155 283 SUPERFAMILY RNA-binding domain, RBD 5 77 IPR035979 GO:0003676
Aev05g0155 283 MobiDBLite consensus disorder prediction 253 277 - -
Aev05g0155 283 MobiDBLite consensus disorder prediction 227 251 - -
Aev05g0155 283 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 263 - -
Aev05g0155 283 PANTHER BINDING PARTNER OF ACD11 1 3 263 - -
Aev05g0155 283 Coils Coil 233 253 - -
Aev05g0155 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 67 IPR000504 GO:0003723
Aev05g0155 283 Gene3D - 2 75 IPR012677 -
Aev05g0155 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0155 Aev-Chr5 1199913 1202862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0155 - - gmx:100809613 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0155 05 1199913 1202862 Aev05g0155 05 1199913 1202862 ECH