Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0052 ATGGCTAGCAACGACGAGGCTTCAGCGTTAGGGGAAGCAAAGGTTCCATTGTTGTTGGGGAACAACGATCGTGATCATGGAGGAGAAGCAGAACAGAACGAATCAGCTCTGTGCGAACGGGTTTGGACGGAATCAAAGAAGCTATGGCACATAGTGGGACCCGCAATCTTCAGCAGAATCACTTCGTACATGATGCTGGTCATCACGCAAGCCTTTGCAGGACACCTCGGAGACCTTGAGCTCGCCGCTTTCTCCATTGCCAACAATGTTATTGTCGGCTTCGACTTTGGCCTCTTGTTGGGCATGGCAAGTGCATTGGAAACACTGTGCGGGCAGGCCTTTGGAGCAAAGAAGCACCACATGCTAGGAGTGTACATGCAGCGCTCATGGATCGTCCTCTTCATATGCTGTGTCCTGCTTCTGCCTATTTACATATTTGCCACTCCGGTTCTGAGGGTGCTGGGCCAGCCGGAGGAGGTGGCCGTTCTCGCCGGGGAGGTGGCGCTCTGGATGATTCCCATTCACTTCAGCTTCGCCTTTCAGTTCCCTCTGCAGAGGTTCCTCCAGAGCCAGCTCAAGACCGGCGTCATTGCCTGGGTCTCCCTTGTGGCCCTCCTCGTCCATGTTCTCGTCAGCTGGTTCTTCGTGTTTCAGCTCAAGTTTGGGATTGTTGGGACCGCCGCTACTGTTAATTTCTCTTGGTGGGTCTTGACTCTGGGCCTCTTTGGCTACACTGTTCTGGGCGGTTGCCCCAGGACTTGGACTGGTTTCTCCCTTGAAGCTTTCTCTGGACTTTGGGACTTTGTTAAGCTCTCTGCTGCTTCTGGAGTCATGCTCTGCTTAGAGAATTGGTATTATAGGATTCTCATATTGATGACTGGGAATCTGCCGAATGCAGAGATTGCAGTGGATGCTCTGTCCATATGTATGACCATAAACGGTTTGGAGATGATGATTCCTCTGGCGTTCTTTGCAGCTACAGGAGTGAGGGTTGCAAACGAGCTCGGAGCAGGGAATGGAAAAGGAGCAAAGTTTGCGACAATGGTATCGGTGTTGACCTCGATTTTAATAGGAGTGTTCTTCTGGACCCTCATATTGACTCTGCATGACAAGTTTGGATACATATTCTCTTCGAGCAAAGCTGTCCTTGACGAAGTGAACAGCCTCTCCCTTCTGCTAGCCTTCACCATTCTGCTCAACAGCGTTCAGCCTGTTCTCTCCGGCGTCGCTGTGGGCTCAGGCTGGCAGTCATACGTTGCCTACATCAATTTGGGCTGCTACTATCTCATCGGCGTCCCTCTTGGCATTTTGATGGGCTGGGTCTTCCATCAAGGAGTTATGGGAATTTGGGCGGGTATGATTTTTGGTGGAACAGCTACTCAGACATTGATATTAGGAGTCATAACCATTCGATGCGACTGGGACAAAGAGGCAGAGAGAGCCAAATTGCATTTGAGAAAATGGGATGATCCAAAACAAGTGATCTAA 1488 0.5067 MASNDEASALGEAKVPLLLGNNDRDHGGEAEQNESALCERVWTESKKLWHIVGPAIFSRITSYMMLVITQAFAGHLGDLELAAFSIANNVIVGFDFGLLLGMASALETLCGQAFGAKKHHMLGVYMQRSWIVLFICCVLLLPIYIFATPVLRVLGQPEEVAVLAGEVALWMIPIHFSFAFQFPLQRFLQSQLKTGVIAWVSLVALLVHVLVSWFFVFQLKFGIVGTAATVNFSWWVLTLGLFGYTVLGGCPRTWTGFSLEAFSGLWDFVKLSAASGVMLCLENWYYRILILMTGNLPNAEIAVDALSICMTINGLEMMIPLAFFAATGVRVANELGAGNGKGAKFATMVSVLTSILIGVFFWTLILTLHDKFGYIFSSSKAVLDEVNSLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYLIGVPLGILMGWVFHQGVMGIWAGMIFGGTATQTLILGVITIRCDWDKEAERAKLHLRKWDDPKQVI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0052 495 PANTHER PROTEIN DETOXIFICATION 27 482 - -
Aev05g0052 495 CDD MATE_eukaryotic 44 480 IPR045069 GO:0042910|GO:1990961
Aev05g0052 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 482 - -
Aev05g0052 495 TIGRFAM matE: MATE efflux family protein 54 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g0052 495 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g0052 495 Pfam MatE 276 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0052 Aev-Chr5 401155 405776 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0052 K03327 - gmx:100796652 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0052 05 401155 405776 Aev05g0052 05 401155 405776 ECH