Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0033 ATGAAGAGGAAGAGAGGATTTTCGCAGCTACTGTCTTGCATGCTCTTGTTGGTGGTTGTGTGTGTGAGCTTCTCCTCCTCCATAATCTCTGTTGAGGCAGCAATAAGCAAGATTCATCACAACAACAGAAAACTCCCTAAACGCCGCAGCAGCACTCGAGGCCCAGCACCAGCTCCAGCTCCTCTTCCTCATCCTCCAACCCCAATCAACACTTTTGATATTCTGTCTTTCGGTGCAAAGGGCAATGGAATTTCTGATGATTCAGAGGCACTTATAGCTGCATGGGGAAGGGCATGCAGAGTTGCTGGTGCTACAGTTAGAGTTCCACCAAAACTCAATTTCCTCATCAAGCCCCTCACTTTACAAGGCCCTTGTATGCCTGCTCTTACTCTTCAGATAGATGGAACAGTGTTGGGTCCTCCAGAGGCATCTTCATATTGGACAGAGTCAGAGTCGAGTCTGTTCCAGTGGATCAATTTCAAATGCCTGCAGAATTTCACCATCACAGGCTCCGGCACTGTTGATGCCCAAGGCTCTAACTGGTGGACCTCCTCAGAATCTTATCATATGCAGAAGACTTACTCTAAATACATTCCAGACATGAAGCCAACTGCTATAAGGTTCTATTCCAGCAACCTTGTAACTGTTCGGGATATAAAAATCATAAACAGTCCTCTGTGCCATCTTAAATTCGACAACTCAAAAGGGATTAAAGTTTCTAACATCACAATTTCTTCACCTGGAAATAGCCCAAACACTGATGGCATTCACTTGCAGAACACACAGGATGTTGAAATTCTGCATTCTGATATTGGAACTGGAGATGACTGTGTATCCATCCAGACCGGCTGCTCTAATGTTCATGTCCACCACCTTAAGTGTGGCCCTGGCCATGGTATAAGTATAGGAGGGCTAGGGAAAGACAAGAGTGCGGCATGCGTCTCTGACATCACCATTGAGGATATCTCAATGAAAAATACTCTTTATGGAGCAAGGATCAAAACATGGCAGGGAGGCATTGGGATGGTTAAGAATGTGTCGTTTTCCAGAATCCAAGTGTACGATGTAATGTGGCCAATCATGATAGACCAATACTATTGTGACAAGCACAAATGCAAGAACCAGACAGGGACGGTGGTGATTTCTGGAGTCAGGTTTGGTCAAATAAGTGGGACTTATGGAGTTCAGCCCGTGCATCTCGCCTGCAGCAATGCCATACCATGCACGGATGTCGATCTGATTGATATTCAGCTCACGCCTAGTTCCCTCGAATACAGAGCCTTTCAGCAACAAACTCTTTGCTGGAACTCTTATGGAAAGTCGCAAGGCCAATTGCTACCTTCAAGCATTGATTCTTGCTTGAGAAGTGGTGGTGGACTAATCAAGAGGATTGCAAGATCACATGACACTCTATGTTACAGACAGTACTAA 1431 0.4535 MKRKRGFSQLLSCMLLLVVVCVSFSSSIISVEAAISKIHHNNRKLPKRRSSTRGPAPAPAPLPHPPTPINTFDILSFGAKGNGISDDSEALIAAWGRACRVAGATVRVPPKLNFLIKPLTLQGPCMPALTLQIDGTVLGPPEASSYWTESESSLFQWINFKCLQNFTITGSGTVDAQGSNWWTSSESYHMQKTYSKYIPDMKPTAIRFYSSNLVTVRDIKIINSPLCHLKFDNSKGIKVSNITISSPGNSPNTDGIHLQNTQDVEILHSDIGTGDDCVSIQTGCSNVHVHHLKCGPGHGISIGGLGKDKSAACVSDITIEDISMKNTLYGARIKTWQGGIGMVKNVSFSRIQVYDVMWPIMIDQYYCDKHKCKNQTGTVVISGVRFGQISGTYGVQPVHLACSNAIPCTDVDLIDIQLTPSSLEYRAFQQQTLCWNSYGKSQGQLLPSSIDSCLRSGGGLIKRIARSHDTLCYRQY* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0033 476 Pfam Glycosyl hydrolases family 28 105 421 IPR000743 GO:0004650|GO:0005975
Aev05g0033 476 SMART pbh1 284 304 IPR006626 -
Aev05g0033 476 SMART pbh1 314 335 IPR006626 -
Aev05g0033 476 SMART pbh1 234 260 IPR006626 -
Aev05g0033 476 SMART pbh1 343 364 IPR006626 -
Aev05g0033 476 SMART pbh1 261 282 IPR006626 -
Aev05g0033 476 PANTHER - 27 460 - -
Aev05g0033 476 Gene3D - 65 455 IPR012334 -
Aev05g0033 476 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 27 460 - -
Aev05g0033 476 SUPERFAMILY Pectin lyase-like 64 449 IPR011050 -
Aev05g0033 476 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0033 Aev-Chr5 248462 251093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0033 15 472 Glycoside Hydrolase AT3G26610 59.657 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0033 K01213 - gmx:100803027 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0033 05 248462 251093 Aev05g0033 05 248462 251093 ECH