Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3780 ATGAGCGAGAGTAACAGCAACAGCAACGGGGTGGGAATCATCAAGAGGAGCAGCAGCAATGAAGAAAAAGGAAGAGATCTGGGGCTGTACTTCCTGGAGGTGTGCCGGCGAGAAGGAGGAAGAGGAGGCGGAGGAGGAGGTTGGAGGTGGAGGGAGGCGGAGGAAGAGGAGGAGGAGGAGAAGACCCTCCCTAGCGAGCTGAACACCATCAACAGCTCGGGGGGGTTCGTGGTAGTGTCGACGGATAAGCTGTCTGTGAAGTACACCAACGTGAACATGCACGGCCACGACGTCGGCGTGATTCAGGCGAACAGGGCTGCTCCGACGAAGCGCCTTATGTACTACTTCGAGATTTATGTGAAGGACGCTGGCTCTAAGGGCCAGATTGCCATTGGCTTCACCTCCGACTCCTTCAAGATGCGTAGGCAGCCCGGCTGGGAGGCCAACAGCTGTGGATATCACGGCGACGATGGATTGCTTTATCGCGGACATGGCAAGGGCGAAGCCTTTGGCCCTACTTATACATCTGGCGATATTGTTGGTGCTGGAATCAACTATGCCGCTCAGGAATTCTTCTTCACTAAAAATGCACGAATTGTTGGGACAGTCTACAAGGACATGAAGGGTCCCCTTTTTCCAACCATTGCTGTTCATAGCCAAAATGAAGAGGTGCATGTCAACTTTGGGAAGAAACCATTTGCTTTTGACCTCAAGGAATTTGAAGCACAAGAAAGAATTAAGCAGCAGCTGAAAATAGAGGAAATACCTGTTCCGTCAAATGTCAGTTATGGAATTGTCCGTTCCTACTTGCTACACTATGGCTATGATGATACATTGAATTCCTTTGATGTGGCTAGTAGAAGTACTGTTCCTCCTATATACATAGCTCAAGAAAATGGAATTGATGAGCAGGAAATTATGTATGCATTAAATCACAGAAAGACTCTTCGACAGCTAATTAGGGATGGGGAGATTGATGCTGCATTTGGTAAATTGCGTGAATGGTATCCCCAGATTGTTAAGGACAATACATCTGCTACGTGCTTTCTGCTTCATTGTCAAAAGTTTATTGAATTAGTTCGGATTGGAGCACTGGAGGAAGCTGTAAAATATGGAAGAGTAGAATTGTCAAGTTTTTTTGCGTTGCCTGTCTTTGAGGATTTAGTTCAGGATTGCGTTGCTTTGCTGGCATATGAACGACCACTGGAATCCTCTGTAGGCTATCTCCTAAAAGATTCGCAACGCGAAGTTGTAGCTGACACAGTAAATGCCTTGATCTTGTCCACAAATCCCAATATGAAAGAATCAAAAAATTGTCTGCACTCTTATCTTGAGAGGTTACTTAGACAGCTCACTGCTTGTTGCTTAGAGAAGCGATCTTTGAGCGGAGAGCAGGGAGAAGCTTTCCAACTTCATAGAGTGCTTAGCAGTGGTAAACGAGGCTAG 1446 0.4675 MSESNSNSNGVGIIKRSSSNEEKGRDLGLYFLEVCRREGGRGGGGGGWRWREAEEEEEEEKTLPSELNTINSSGGFVVVSTDKLSVKYTNVNMHGHDVGVIQANRAAPTKRLMYYFEIYVKDAGSKGQIAIGFTSDSFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDIVGAGINYAAQEFFFTKNARIVGTVYKDMKGPLFPTIAVHSQNEEVHVNFGKKPFAFDLKEFEAQERIKQQLKIEEIPVPSNVSYGIVRSYLLHYGYDDTLNSFDVASRSTVPPIYIAQENGIDEQEIMYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIVKDNTSATCFLLHCQKFIELVRIGALEEAVKYGRVELSSFFALPVFEDLVQDCVALLAYERPLESSVGYLLKDSQREVVADTVNALILSTNPNMKESKNCLHSYLERLLRQLTACCLEKRSLSGEQGEAFQLHRVLSSGKRG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3780 481 ProSiteProfiles B30.2/SPRY domain profile. 45 233 IPR001870 -
Aev04g3780 481 SMART toby_final6 363 464 IPR013144 -
Aev04g3780 481 PANTHER RAN BINDING PROTEIN 9-RELATED 55 479 - -
Aev04g3780 481 MobiDBLite consensus disorder prediction 1 16 - -
Aev04g3780 481 Pfam SPRY domain 114 230 IPR003877 GO:0005515
Aev04g3780 481 Pfam CTLH/CRA C-terminal to LisH motif domain 311 454 IPR024964 -
Aev04g3780 481 SUPERFAMILY Concanavalin A-like lectins/glucanases 71 235 IPR013320 -
Aev04g3780 481 Gene3D - 50 249 IPR043136 -
Aev04g3780 481 CDD SPRY_RanBP_like 99 229 IPR044736 -
Aev04g3780 481 MobiDBLite consensus disorder prediction 40 62 - -
Aev04g3780 481 MobiDBLite consensus disorder prediction 1 21 - -
Aev04g3780 481 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 309 367 IPR006595 -
Aev04g3780 481 SMART ctlh 309 367 IPR006595 -
Aev04g3780 481 SMART SPRY_3 111 232 IPR003877 GO:0005515
Aev04g3780 481 PANTHER RAN-BINDING PROTEIN M HOMOLOG 55 479 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3780 K23334 - gmx:100805319 788.875