Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3777 ATGGAAGACATTGAGGATTTGCTTATCGGAAGCGGAAATGGAACTCCGGCGGGCTTTCGGTTGCCGGTTGCGGCCGTTGGTGTTGGAACAAACACTAAGAAGAAGAATCAGAATCAGAAGAATCTTCTTCTTCTACGATCTTCTTCTTCTGCAATCCCTGGCACACAGACAATCTACATCAAGACCTTCGGATGCTCCCATAACCAGAGCGATAGCGAATACATGGCCGGCCAGCTCTCAGCTTTTGGTTATTCCCTGACTGACTCTCCCGACGAAGCTGATCTCTGGCTCATCAATACTTGCACGGTCAAGTCCCCCAGTCAATCTGCCATGGATACCATAATAGCAAAAGGAAAATCTTCAAACAAACCACTAGTTGTTGCTGGCTGCGTCCCTCAGGGAAGTCGAGCTTTGAAAGAGCTCCAAGGGATCAGCATAGTTGGAGTCCAGCAGATTGATCGTGTTGTTGAAGTTGTCGAGGAGACTTTAAAGGGTCATGAAGTCCGCCTTTTGACCCGTAAGACTTTGCCCGCACTTGACCTTCCAAAGGTTAGAAAGAACAAGTTTGTCGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACAAAGCATGCTCGTGGCCACCTAGGGAGTTACACTATAGACAGCCTTGTAGGGCGCATAAAATCTGTTATATCTGATGGAGTTAAAGAGATATGGCTCAGCAGTGAAGACACCGGAGCATATGGTCGTGACATTGGTGTCAATCTTCCAACTTTATTGAAAGCCTTAGTAGCAGAACTCCCACCTGATGGAAGCACGATGCTCCGAATTGGAATGACTAATCCACCCTTTATCCTTGAGCACTTGAAGGAGATAGCAGAGATTTTGCGCCATCCATGTGTATACTCTTTTTTGCATGTACCAGTTCAGTCTGGAAGTGACACTATTCTGACTGCAATGAATCGGGAATATACTGTGAGTGACTTTAGGACTGTTGTAGATACCTTAACGGAGCTCGTTCAAGAGATGCAGATTGCCACTGACATTATATGTGGATTTCCTGGTGAAACTGATGAAGATTTTGAACAAACTATCGATCTCGTTAAAGAGTACAAATTCCAACAAGTTCACATTTCACAATTTTATCCTCGACCAGGGACCCCGGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTAGTGAAGAGAAGAAGCCGTGAACTGACGAATCTATTTGAAGAGTTCTCCCCATATACCGGGATGGAAGGCAAAGTGGAAAGAATTTGGATTACTGATATTGCATCCGACGGAGTTCACTTGGTTGGTCATACGAAGGGATATGTACAAGTTCTTGTAGTTGCTCCAGATCATATGCTGGGAACTTCAGCTATGGTTAAGATAACATCCGTGGGAAGGTGGTCAGTTTTTGGGAAAGTAATTGAGACGATCAACCATGTAAGAGATAGAGACGTCAATGTCAATGAAGCTGCAGCTTCGAGCAAGGAGGAGGAGGTTCCTAAACAGGATATGTGTCGCTATAACCCCACAGCCACAGGCACAGACAATCCTGATGGATTATCAGAACAGTCAAAATCCTGTGCTTGTGGAAATGATGACAGCTGCTGTAGTCTCGAGAACAGTGAAAGCTCAAGAGGCGCTGTAGTGCAACAGAATCAAAACAGTACAAGCTTCATTGGATGGGTACTGAGGAAGCAGCGGAAGCATTTACACAAAAGGGTAGAAAGTGAACTTGCCTCAGCCTCAGGGAACGCGACGAAGTGGGACTCTGTTGATAAGGCTCTTTTTGGTGGAATATCTATCAGCATCTTCACGATTATTGCTCTACTATTAGCTCTTACGTTTTCTGTATGGTCACAGTAA 1878 0.4478 MEDIEDLLIGSGNGTPAGFRLPVAAVGVGTNTKKKNQNQKNLLLLRSSSSAIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYSLTDSPDEADLWLINTCTVKSPSQSAMDTIIAKGKSSNKPLVVAGCVPQGSRALKELQGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRIKSVISDGVKEIWLSSEDTGAYGRDIGVNLPTLLKALVAELPPDGSTMLRIGMTNPPFILEHLKEIAEILRHPCVYSFLHVPVQSGSDTILTAMNREYTVSDFRTVVDTLTELVQEMQIATDIICGFPGETDEDFEQTIDLVKEYKFQQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNLFEEFSPYTGMEGKVERIWITDIASDGVHLVGHTKGYVQVLVVAPDHMLGTSAMVKITSVGRWSVFGKVIETINHVRDRDVNVNEAAASSKEEEVPKQDMCRYNPTATGTDNPDGLSEQSKSCACGNDDSCCSLENSESSRGAVVQQNQNSTSFIGWVLRKQRKHLHKRVESELASASGNATKWDSVDKALFGGISISIFTIIALLLALTFSVWSQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3777 625 TIGRFAM TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 57 474 IPR005839 GO:0006400|GO:0016740|GO:0051539
Aev04g3777 625 CDD Radical_SAM 193 397 - -
Aev04g3777 625 ProSitePatterns Methylthiotransferase radical SAM domain signature. 193 213 IPR020612 GO:0051539
Aev04g3777 625 Pfam Uncharacterized protein family UPF0004 58 136 IPR013848 GO:0035596|GO:0051539
Aev04g3777 625 SMART MiaB 189 413 IPR006638 GO:0003824|GO:0051536
Aev04g3777 625 Gene3D tm_1862 like domain 187 418 IPR023404 -
Aev04g3777 625 SFLD Radical SAM 137 403 IPR007197 GO:0003824|GO:0051536
Aev04g3777 625 TIGRFAM MiaB-like-B: MiaB-like tRNA modifying enzyme, archaeal-type 58 479 IPR006466 GO:0035598|GO:0035600
Aev04g3777 625 ProSiteProfiles Radical SAM core domain profile. 185 417 IPR007197 GO:0003824|GO:0051536
Aev04g3777 625 Pfam Radical SAM superfamily 196 368 IPR007197 GO:0003824|GO:0051536
Aev04g3777 625 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 56 164 IPR013848 GO:0035596|GO:0051539
Aev04g3777 625 SUPERFAMILY Radical SAM enzymes 179 413 - -
Aev04g3777 625 Gene3D - 57 176 IPR038135 -
Aev04g3777 625 PANTHER RADICAL SAM PROTEINS 1 502 - -
Aev04g3777 625 SFLD B12-binding domain containing 137 403 - -
Aev04g3777 625 ProSiteProfiles TRAM domain profile. 418 480 IPR002792 -
Aev04g3777 625 MobiDBLite consensus disorder prediction 496 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3777 Aev-Chr4 34923759 34928154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3777 K15865 - gmx:100798865 936.791