Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3771 ATGGCTGACAATGATTCAAACCCCACTCCTCCTCCTCCTGCTCCCCCTGCTACAGATAACGAAGCCCCGCCACCGCTGCCGCCCCAGGCTTCGGCGGAGCCTGATTTGCCCACCCCCGAAGTAGAATCCCTCGACAATAACACCACCGTCGTCACTACTACCTCTGAGTCTGACACCAAGGACTTAACTCCTCCGCCGCCGTCACAACAACCTGAAGCTGCTACAGCAGAGCCCTCACACTCCTCAGAGGACGTAAAACCTGACACCTCAGAAGATGTAGATGTGGCTGCCGCTGTGGCTCAAGACCAGACGATCAAGCCTCCCGAACCCGAACCCGAACCCGAACCCGAACCCGAAGAGCATAAGAAGCTTGCTCCTCACAATCTGGTATCCTTCAAGGAAGAGAGCAACAGGGTTTCCGATCTCTCGGATTCTGAGAGAACTTGTCTGGAAGAGTTCAAGAAGCTCCTCGCAGAGTCCCTCTTCCCCAAAAAGGAAAAAGGAGAAGGAGAGGCAAGCGAAGAGGTTTCCATCTGGGGAGTCCCCCTGCTGAAGGACGAGAGGAGCGACGTGATTCTGCTCAAGTTCCTGAGAGCCCGCGAGTTCAAGGTGAAGGAGGCACTGAGCATGATCAACAACACCCTGCAGTGGCGCAAGGAGTTCAACATCGAGGCCCTCCTCCACGAGGATCTCGGCGACGACTTGGACAAGGTCGTCTTCATGCACGGCCACTCCAGAGAGGGCCACCCCGTCTGCTACAACGTCTACGGTGAGTTCCAGAACAAGGACCTCTATGACAAGGCCTTCTCCACCGAGGAGAGGCGCACCAAGTTCCTTCGCTGGCGGATTCAGTTCTTGGAGAGGAGTATCCGCACCCTCGACTTCACTCCCGGCGGCATCAACACCATCTTCCAGGTCAATGACCTCAAGAACACCCCTGGCCCTGCTAAAAGGGAACTTCGCATTGCCACCAAACACGCTTTGCAATTGCTCCAGGACAATTACCCCGAGTTTGTTAACAAACAGGTTTTCATCAATGTCCCCTGGTGGTATCTTGCATTCTATACCATGATCAACCCATTCTTGACTCTGAGGACCAAAAGCAAATTTGTGTTTGCTGGGCCATCCAAGTCTCCCGATACCCTTTTCAAGTATATCTCTCCTGAGCAGGTGCCCATTCAGTATGGAGGCCTGAGTGTAGACTTTTGTGACTGCAACCCAGAATTCAGCATCTCTGATCCTGTCACTGAAATTCCAGTTAAACCAACCACGAAGCAAACTGTTGAAATTGCTATTTATGAGAAATGCATCATTGTTTGGGAGCTGCGAGTGGTGGGCTGGGAGGTTAGCTATAGTGCAGAATTCAAGCCAGATGCTAAAGATGGATATACAGTTATTATACAGAAGGCCACAAAGATGTCCTCCACTGATGAGCCTGTGGTTTCCAGTAGCTTTAAAGTTGGTGAGCTGGGCAAATTATTCCTCACGGTCGACAATCCAACCACGAAAAAGAAGAGGCTTCTTTACAGGTTCAAGATCAAAGCCTACTGTGATTGA 1557 0.517 MADNDSNPTPPPPAPPATDNEAPPPLPPQASAEPDLPTPEVESLDNNTTVVTTTSESDTKDLTPPPPSQQPEAATAEPSHSSEDVKPDTSEDVDVAAAVAQDQTIKPPEPEPEPEPEPEEHKKLAPHNLVSFKEESNRVSDLSDSERTCLEEFKKLLAESLFPKKEKGEGEASEEVSIWGVPLLKDERSDVILLKFLRAREFKVKEALSMINNTLQWRKEFNIEALLHEDLGDDLDKVVFMHGHSREGHPVCYNVYGEFQNKDLYDKAFSTEERRTKFLRWRIQFLERSIRTLDFTPGGINTIFQVNDLKNTPGPAKRELRIATKHALQLLQDNYPEFVNKQVFINVPWWYLAFYTMINPFLTLRTKSKFVFAGPSKSPDTLFKYISPEQVPIQYGGLSVDFCDCNPEFSISDPVTEIPVKPTTKQTVEIAIYEKCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSSTDEPVVSSSFKVGELGKLFLTVDNPTTKKKRLLYRFKIKAYCD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3771 518 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 228 397 IPR001251 -
Aev04g3771 518 SUPERFAMILY CRAL/TRIO domain 238 406 IPR036865 -
Aev04g3771 518 MobiDBLite consensus disorder prediction 108 129 - -
Aev04g3771 518 Pfam CRAL/TRIO, N-terminal domain 150 213 IPR011074 -
Aev04g3771 518 SMART sec14_4 233 400 IPR001251 -
Aev04g3771 518 MobiDBLite consensus disorder prediction 1 129 - -
Aev04g3771 518 CDD SEC14 234 398 IPR001251 -
Aev04g3771 518 MobiDBLite consensus disorder prediction 41 63 - -
Aev04g3771 518 Gene3D - 135 432 IPR036865 -
Aev04g3771 518 SUPERFAMILY CRAL/TRIO N-terminal domain 136 229 IPR036273 -
Aev04g3771 518 Pfam CRAL/TRIO domain 238 397 IPR001251 -
Aev04g3771 518 SMART CRAL_TRIO_N_2 189 214 IPR011074 -
Aev04g3771 518 PANTHER PATELLIN-1 65 518 IPR044834 GO:0008289
Aev04g3771 518 PANTHER PATELLIN-3 65 518 - -
Aev04g3771 518 MobiDBLite consensus disorder prediction 1 34 - -
Aev04g3771 518 PRINTS Cellular retinaldehyde-binding protein signature 355 374 - -
Aev04g3771 518 PRINTS Cellular retinaldehyde-binding protein signature 192 214 - -
Aev04g3771 518 ProSiteProfiles GOLD domain profile. 408 513 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3771 Aev-Chr4 34891311 34893232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3771 193 392 Acyl Lipid Metabolism Gene Families AT1G55840 29.630 9.01e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3771 - - gmx:100804006 637.876