Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3753 ATGGATTCAACTTCTTCTTCGTCGTCGCAATCCCTCGCTTTCTATGACTTTCTGGATCGCATGCGAAACCCTGCTTCCCTCGATCTCCTCCGATCCATTAAGAGGCAAGGATTAGAGAAATATATAATGACTAAATTGTTCTCCCGGACATTTGCTGCTTCCCCTGAGGATTCAAAAATTGATAATGAAATATCGGAGAAAATATGCTTGCTGCAAACCTTTCTGAAGCCTGAACATTTGGACATACCAGCATTTCTTCGTAATGAAGCTTCTTTGTTGCTTGCTGAGAAAGAACTGCGGAAAATCAATGCTTTCAAAGCTCCCCGTGAGAAACTCTTATGTATAATGAATTGTTGTAGGGTCATCAATAACCTATTGCTTAATGGAGCAATTTCTGAAAATCATGAGCCAGCTGGAGCTGATGACTTTCTCCCTGTGCTCATATATGTAACAATAAAGGCCAATCCCTCACAGTTGCATTCAAACCTGAGATTCATCCAGTTGTACCGATGGCAAGAAAAACTCATCTCAGAAGCTGCATATTATTTCACAAATCTTGTGTCAGCCATGACATTTATAGTTGACTTAAATGCTACATCCCTCTCCATGGATGAAAACAAATTTGAGGAGAGCATGCAAGCAGCCAAATTGGCCAGTAAAGCAACAAGTGAAGAATCTCAAAGGAACCAACAAGGCAAGATGGAGTGTAGTTCGTCAAAGAAAATGCATGACGAAATCGAAGAGACTAGAGTTATGCTGCCTGAAACAAATTATCCATATATGGAAGCAAAGAGCCGAGAGTTGACAGAGAGAGACGTGGACAGATTATTAACTCTATACAAGGATTTAGTTACAAAGTACTCACGCCTCTGCAAAGCTATCGGCTCCCTTTCAACTTCAGAGAAAGAAACAATCCTTCGTCGTCTATAA 930 0.4065 MDSTSSSSSQSLAFYDFLDRMRNPASLDLLRSIKRQGLEKYIMTKLFSRTFAASPEDSKIDNEISEKICLLQTFLKPEHLDIPAFLRNEASLLLAEKELRKINAFKAPREKLLCIMNCCRVINNLLLNGAISENHEPAGADDFLPVLIYVTIKANPSQLHSNLRFIQLYRWQEKLISEAAYYFTNLVSAMTFIVDLNATSLSMDENKFEESMQAAKLASKATSEESQRNQQGKMECSSSKKMHDEIEETRVMLPETNYPYMEAKSRELTERDVDRLLTLYKDLVTKYSRLCKAIGSLSTSEKETILRRL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3753 309 SUPERFAMILY VPS9 domain 30 212 IPR037191 -
Aev04g3753 309 MobiDBLite consensus disorder prediction 214 243 - -
Aev04g3753 309 PANTHER OS03G0842700 PROTEIN 36 293 - -
Aev04g3753 309 PANTHER OS03G0842700 PROTEIN 6 34 - -
Aev04g3753 309 MobiDBLite consensus disorder prediction 216 236 - -
Aev04g3753 309 SMART vps9_2 94 211 IPR003123 -
Aev04g3753 309 Pfam Vacuolar sorting protein 9 (VPS9) domain 95 195 IPR003123 -
Aev04g3753 309 Gene3D VPS9 domain 55 219 IPR037191 -
Aev04g3753 309 PANTHER RAB GDP/GTP EXCHANGE FACTOR 6 34 IPR045046 GO:0005085|GO:0016192
Aev04g3753 309 ProSiteProfiles VPS9 domain profile. 58 202 IPR003123 -
Aev04g3753 309 PANTHER RAB GDP/GTP EXCHANGE FACTOR 36 293 IPR045046 GO:0005085|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3753 Aev-Chr4 34784400 34787214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3753 K20131 - gmx:100791462 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3753 04 34784400 34787214 Aev04g3753 04 34784400 34787214 ECH