Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev04g3708 | ATGGCATTTCACGTAGCTTGTCCAATTACATGTCGCCGAATCTGCTACTGCACCCTAGGGTTTCCTCGCGAGCTTCAAGGTTCCGAACCTTCCAATGGCTTCCTCCAAGATGTTGCGGCGCTTGGAGAGTTCCTCGCTCAAGGACGGAGTGGCGCTGCCGCTACCGTCAAGGTCTCGGTTCCCAAGGTGGTTCCGCCTCCTCCGCCGCCAACTCCAGCACCAGATGGACTCCCTGCTTCCGGTGAAGAGGAATCCGCGTCGATGAAGGCCAAGCGCGTTGCGTTGCAGCGGAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAGTACGCCCGCCGGTTCGAGTCCGGTGATGTGCCGGATACGTGTGGAAATATTAATGGAGAAGAGCTGGGTAATTCCAACGTCAAAGTCTTTTGTCGAATGTGCAATCGTGTCGAAAACGAAGGGAGTGAGAGAGCGAAGAAGATGCTATCATGTAAAAGTTGTAGTAAGAAGTATCATAGGAACTGCTTGAGAAGTTGGGCCCAAAATAGAGACTTATTTCATTGGAGTTCATGGACCTGTCGGGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTCTGCAAAAGGTGCGACGGTGCTTACCACTGTTATTGTCTGCAGCCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCAAAACACACGAGGTGTCACAGCTGTGGATCTAATGTCCCTGGAAATGGACTAAGTGTGAGATGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAACTATTGTCCTGTTTGTTTGAAGGTTTACAGGGATTCAGAATCAACACCAATGGTATGCTGTGATATTTGCCAGCGCTGGGTGCATTGCCATTGTGACAATATCAGTGATGAAAAATACCTCCAATTTCAAGTGGATGGGAATCTGCAGTATAGATGTTCCACTTGTCGTGGGGAATGTTATCAGATCAAGGGTCTTGAGGATGCAGTTCAAGAGCTTTGGAGGAGGAGGAATATTGCTGATAAAGATTTAATTTTCAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCACCCTTTTCAGATGATGAGGACAGTGGGCCTTTGAAATTAAAGAGTGAATCTTGTCGCTCTTTTAAATTCTCTCTAAAGAATTTGTCCAATAATTCACCAAAGAAGGTGAAAGATTATGGAAAGAAATCTTCAAGCAAAAAGTCTGCTAAGAAAATGGATTCCCAGTCATTTATGACTGGTAAAAATGATGTGTACCATAGTTTTGAAGTACATAATGATGCCAAATCTTTACATAGCTTGGATGATGATAAAAATGATGATGTACAGTCCCAGAGAAATGAAGGTCCTGATGTTTACTCATCCCCTGCTGCTGGAAGCCTGAGTCAAACTGAAGTTTCTTGCCCTATCAATCAGCCAGGGATTTTGAAACGTAAATTTGTTGATGAGGTGATGGTTAGTGATGAAGAAAGGAAGTCCAGAGTTGTTCGAATTAAAAGTACTAAGGCACATACTCTGGATAGTGAAGCGGAGAGTGGAAAACATAATGATAAGACTCAGAATGTGAAAGGGAAGAAGTTGGTCATAAATCTGGGTGCACGGAAAATTAATGTGGCTAGTTCTCCCCGGTCTGATACTTCGAGTTGCCTAAGAGATCAAGATCTTGGTACTGTTAATGGAATTGAAGATATTAGCCAATTGAGGAAGGGAGACAAATTTGTATTAGATAGACATGATGGGAACAGAGTTGACTCTGGCCAATCAAAACTCATAAAGGTTTCAGGAAGAGAAGGAAATTTGATTAAACTAGGAAAAATTAAGCCAGCAGTTCCTGAATTCACTCTGACATCTGGTAGAGGCAATATGTTTGATGGATGTGAAGTTCCTGTATCCCGAACTCGCATCCTGCAGGGAAAACGTAATACTGTTGGACTGGTTGATCAAGTTGGAACCGTGCAACCTACATCAAGAGGTGAGAAGACATATTTGTGGAAGCGGTCAGAAGGCAGCTTTGATGCAAATAATGAGACAGATGACAATAATAATCAAACACGTTCACATTCTTTGCCAAAAGACTCTAAACCGCTGCTGAGACTGAAATTCCGGAAACCTAGCATTGGAAGTCAAAATTCTACCCATCAAGAGGCGGAAAAGATTACAATCAAGGGCCAGAGATCAAAAAGGAAGAGACCCTCGGAGCCTTTTAAGGAGAAAACATCTTTTAATGAGGCTGGAGATGTAAATCAATCACGTCCAGACAGTCTAATGGATGAGATCATGGATGCAAACTGGATATTGATGAAATTGGGTAATGATGCAATCGGAAAGAGAGTTGAAGTTCATCAGACAGCAGACAATTCTTGGCACAAGGGAGTGGTAACTGACATAGTAGAAGGCACCTCAAAGATACATGTCACCTTGGATGATGGGAAGGTGAAGACCTTGGAGCTCCGGAAGCAAGGGGTCCGTTTCGTCCCACAAAAGCAGAAAAGATCAAAGACATGA | 2577 | 0.4416 | MAFHVACPITCRRICYCTLGFPRELQGSEPSNGFLQDVAALGEFLAQGRSGAAATVKVSVPKVVPPPPPPTPAPDGLPASGEEESASMKAKRVALQRKGAAAMIAAEEYARRFESGDVPDTCGNINGEELGNSNVKVFCRMCNRVENEGSERAKKMLSCKSCSKKYHRNCLRSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCHCDNISDEKYLQFQVDGNLQYRCSTCRGECYQIKGLEDAVQELWRRRNIADKDLIFSLRAAAGLPTQEEIFSISPFSDDEDSGPLKLKSESCRSFKFSLKNLSNNSPKKVKDYGKKSSSKKSAKKMDSQSFMTGKNDVYHSFEVHNDAKSLHSLDDDKNDDVQSQRNEGPDVYSSPAAGSLSQTEVSCPINQPGILKRKFVDEVMVSDEERKSRVVRIKSTKAHTLDSEAESGKHNDKTQNVKGKKLVINLGARKINVASSPRSDTSSCLRDQDLGTVNGIEDISQLRKGDKFVLDRHDGNRVDSGQSKLIKVSGREGNLIKLGKIKPAVPEFTLTSGRGNMFDGCEVPVSRTRILQGKRNTVGLVDQVGTVQPTSRGEKTYLWKRSEGSFDANNETDDNNNQTRSHSLPKDSKPLLRLKFRKPSIGSQNSTHQEAEKITIKGQRSKRKRPSEPFKEKTSFNEAGDVNQSRPDSLMDEIMDANWILMKLGNDAIGKRVEVHQTADNSWHKGVVTDIVEGTSKIHVTLDDGKVKTLELRKQGVRFVPQKQKRSKT* | 859 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev04g3708 | 858 | ProSiteProfiles | Zinc finger PHD-type profile. | 274 | 333 | IPR019787 | - | |
| Aev04g3708 | 858 | SMART | PHD_3 | 276 | 331 | IPR001965 | - | |
| Aev04g3708 | 858 | SMART | PHD_3 | 193 | 239 | IPR001965 | - | |
| Aev04g3708 | 858 | SMART | PHD_3 | 138 | 192 | IPR001965 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 455 | 489 | - | - | |
| Aev04g3708 | 858 | ProSiteProfiles | Zinc finger PHD-type profile. | 136 | 194 | IPR019787 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 742 | 764 | - | - | |
| Aev04g3708 | 858 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 271 | 333 | IPR013083 | - | |
| Aev04g3708 | 858 | SUPERFAMILY | FYVE/PHD zinc finger | 183 | 244 | IPR011011 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 455 | 469 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 470 | 489 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 410 | 434 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 61 | 76 | - | - | |
| Aev04g3708 | 858 | SUPERFAMILY | FYVE/PHD zinc finger | 275 | 334 | IPR011011 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 692 | 776 | - | - | |
| Aev04g3708 | 858 | SUPERFAMILY | FYVE/PHD zinc finger | 127 | 193 | IPR011011 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 529 | 548 | - | - | |
| Aev04g3708 | 858 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 248 | IPR013083 | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 413 | 427 | - | - | |
| Aev04g3708 | 858 | PANTHER | PHD FINGER FAMILY PROTEIN | 2 | 852 | - | - | |
| Aev04g3708 | 858 | PANTHER | HISTONE ACETYLTRANSFERASE | 2 | 852 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 529 | 546 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 61 | 87 | - | - | |
| Aev04g3708 | 858 | MobiDBLite | consensus disorder prediction | 692 | 714 | - | - | |
| Aev04g3708 | 858 | ProSitePatterns | Zinc finger PHD-type signature. | 139 | 191 | IPR019786 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev04g3708 | Aev-Chr4 | 34483912 | 34488983 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev04g3708 | - | - | gmx:100815407 | 1270.37 |