Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3674 ATGGATGGTTACGAGGCTACTAGGATTGTGTTCTCAAGGATCCAAAGCTTGGACCCTGAAAATGCTTCAAAGATCATGGGTCTGCTTCTGATTCAAGACCATGGTGAGAAAGAGATGATAAGGCTAGCATTTGGGCCAGAAGCTCTTGTTCACTCTGTGATTGTGAAAGCAAGAAAGGACTTGGGTTTGCCTTCAAACTCTCCACCTACACCTTCAACTCCACCATCTCCATCACCTTTCCTTTCCAACACCACAAACTCTGTTCCTGTTCCTGTTCCCATCTCAAGGCAAAGCTCAAACTCTTCCTCTTCTAGGCTTGGTGGGATCAATCTTCCACCTGCTCTAACTATCCCAAACCCTTCCTCTACTTCAGCTTCTTGGGGTGCCATGTCTGAGCAGCTTCAGAACCCTGAGGACTTGATGAGCCCTAACAATTTGGTTGTTGGGTCTTCAACAACTTCTTCATCTTCTTTACCCTTCTATGCTAATGGAGGGTCAGATCCAATTGATGAGTTCCAGCTTCAGGACCAACTTTCCTTCTTGAATGATGGTTCTCCAACTCTTGGTGGCCATAAGAACCCTGATTTGTTCTACCCTCACTCTGACTTGTCTTCTAGTCCTACTAGTGCTGCTGACCCTTCTCTCTTCCCTTCTTATGGTTGGGGAGGCTCACTTCATAGGAGGAGCTGCTCTGTGAATGATGCTTGTTTGGGTTCTGAGGACCCTAACTCTGGATTTGGGTGGAAGCCATGTCTCTACTTTGCTAGAGGGTACTGCAAGAATGGAACTAGCTGCAGGTTCCTCCATGGTGGTCTTGGTGATGCTGAAGGTGCTGCAATGGTTGGTTCTCCAAGCAAGATTGACATGATGGAGCAGTGTCATGAGTTACTCAGATCCAAGACAGCTCAGCAGCAAAGACTTGCAGCTGCTTCTCAGCTCATGGCTTCTTCATCTTTTCCTTACTCACCAAAGTGCATGAATTTCCTGTTGCAGCAGCAGCAGAATGATACTCAAAGAGCTGCTGCAGCAGCTCTTATGATGAATGAGGACTTGCACAAATTTGGGAGATCCAGGCTTGAAAGGAATGATTTTGCTTTGAACAGCCCTGGAATGGTCAACCCTGCTTCAAGGCAGATCTACTTGACCTTCCCAGCTGATAGCACTTTCAGAGAGGAAGATGTTTCAAATTACTTCAGCATTTATGGGCCAGTTCAAGATGTGAGGATCCCATATCAGCAGAAGCGAATGTTTGGTTTTGTTACTTTTGTTTATCCTGAGACTGTGAAGCTCATTCTCTCCAAAGGGAACCCTCACTTTGTGTGTGATGCTAGAGTTCTTGTTAAGCCTTACAAGGAGAAAGGCAAAGTCCCAGACAAGTACAGGAAGCAGCAGCAACAGGTAGATAGGGATTTCTCACCTTGTGGCACTCCTACTGGTCTAGATGCTAGAGACCACCAATATGATCTCCCACTTGGAGGAAGAATGTTCTACAATGCTCAAGACATGCTGTGGAGGAGGAAGTTGGAGGAAGCTGATTTGCAGCAAGCACTTGAGATCCAAAGTAGGAGATTGATGGGTCTGCAACTCCTTGATATCAAGAAGCAGCACCACCGTGCGCTTTCCGCCGGAAGTCCTATTCCTTCTCCAACACAGTCTCCAAACATGTTCAACCACAACCTTGTTCTTCCCTCATTTCACACCACCACAGAGTCCCCAGAAGAGAATAATGGTTCATCAAATTCTGCAGCAGCAAGTACTGCACCGGTTTCTGGTGTTCAGCAACAAGTGAATATTATTTCTGTTAGCAAGGAAGTGGTGAGTGGTGAGAATGGATATAGTGATGGAAATGGCAGTGGAAAGCAGAGCCCAAGTAGTAATAATAATAATAATAACAACAATGAAGACCGTGATCTACAAGAATGTTTGGAGCACAATCTCCCTGATAGCCCATTTGCTTCACCTACAAAAGCTGCTGGAGATTTCAACATGGCTGCATTCTCCAATGGACCTAATGAGGCCATTGAATCAGATGCATCAGCTGCTTCTGCCAACCCCAAATTTGGTACTACTAATTCACTTCTTCCATCAGCAGCCTCTGCTCTTGACATGGGAACTTTCAAATCTTTTAACTGCCAATTACCTAGGTTCTCCTCTGGCCATGGAACTATTGGGATGTTAGCCGGCACCGGCGGTCCGATCGGAATTTAG 2208 0.4592 MDGYEATRIVFSRIQSLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVIVKARKDLGLPSNSPPTPSTPPSPSPFLSNTTNSVPVPVPISRQSSNSSSSRLGGINLPPALTIPNPSSTSASWGAMSEQLQNPEDLMSPNNLVVGSSTTSSSSLPFYANGGSDPIDEFQLQDQLSFLNDGSPTLGGHKNPDLFYPHSDLSSSPTSAADPSLFPSYGWGGSLHRRSCSVNDACLGSEDPNSGFGWKPCLYFARGYCKNGTSCRFLHGGLGDAEGAAMVGSPSKIDMMEQCHELLRSKTAQQQRLAAASQLMASSSFPYSPKCMNFLLQQQQNDTQRAAAAALMMNEDLHKFGRSRLERNDFALNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVDRDFSPCGTPTGLDARDHQYDLPLGGRMFYNAQDMLWRRKLEEADLQQALEIQSRRLMGLQLLDIKKQHHRALSAGSPIPSPTQSPNMFNHNLVLPSFHTTTESPEENNGSSNSAAASTAPVSGVQQQVNIISVSKEVVSGENGYSDGNGSGKQSPSSNNNNNNNNEDRDLQECLEHNLPDSPFASPTKAAGDFNMAAFSNGPNEAIESDASAASANPKFGTTNSLLPSAASALDMGTFKSFNCQLPRFSSGHGTIGMLAGTGGPIGI* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3674 735 MobiDBLite consensus disorder prediction 566 589 - -
Aev04g3674 735 MobiDBLite consensus disorder prediction 61 117 - -
Aev04g3674 735 SMART rrm1_1 378 448 IPR000504 GO:0003723
Aev04g3674 735 MobiDBLite consensus disorder prediction 607 635 - -
Aev04g3674 735 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 389 434 IPR000504 GO:0003723
Aev04g3674 735 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 723 - -
Aev04g3674 735 CDD RRM_AtC3H46_like 379 448 IPR034365 -
Aev04g3674 735 MobiDBLite consensus disorder prediction 79 117 - -
Aev04g3674 735 Gene3D - 375 472 IPR012677 -
Aev04g3674 735 ProSiteProfiles Zinc finger C3H1-type profile. 245 272 IPR000571 GO:0046872
Aev04g3674 735 SMART c3hfinal6 247 271 IPR000571 GO:0046872
Aev04g3674 735 Gene3D - 239 332 - -
Aev04g3674 735 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 723 - -
Aev04g3674 735 SUPERFAMILY CCCH zinc finger 248 270 IPR036855 GO:0046872
Aev04g3674 735 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 250 270 IPR000571 GO:0046872
Aev04g3674 735 MobiDBLite consensus disorder prediction 457 479 - -
Aev04g3674 735 SUPERFAMILY RNA-binding domain, RBD 389 471 IPR035979 GO:0003676
Aev04g3674 735 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 377 453 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3674 Aev-Chr4 34280211 34283324 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3674 - - adu:107477482 1105.12