Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3669 ATGAGTAATTCTAAGGTGTTTGTATTTGGATCTTTTACCGAAGATGAGACCAGATCATTGCTGCTAAAGCAGTCTTCTGGTAAAGTTAGGAATGAAAAACCTGTGGAGAAGAATCAACTGCAATTTGGTTCTGTAAATGTTGCATCTATTGAATCAAGTAACCTGCCAAATTCACGAAAAGCACCTAGTGCTCCTCCCTCTGATTCTCTGAAATGCAATGGTGTGAGCAGTGTCAGGGATAATTTACCTGGAGCATCAGGAACTATAAAGGAGAATGGCAACATTGCCAATTGCTCCATTGTTCCATCGAGTACTGTTATTGTAAACGAAGTCAAAGAATATAGTGGTCATTCTGTTCCTTCACTTGATGAGGATGTTCCCTCAAATCAGTTTACGAGTTTGAGCCTTGATGCTTCGGAGGCAGAAGGACTGAATAATGTATGGAAAATTGGTAGTGGTAATGGGTCTTCATCAAAATTATTTAATCAAGACTCCAGAAAGGCACCTAATGGGCATATCGTTGCTCATGTTAAAGACCTACTGCCTCGAGGCCTAATTAACTCGGGGAATCTATGCTTCCTTAATGCAACCTTGCAGGCTCTCTTGTCTTGTTCTCCTTTTGTTCAGCTTTTGCAAGAGTTAAGAAGTCGCAACATTCCTAAGGTTGGTTATCCGACATTGACTGCATTCACTGAGTTCATAACTCAATTTGATGTGCCAAGCACCACAAAAATAAAGAAAGATACAGACACTTTTGAGACTGGAAGGCCATTTTGCCCAACTATTTTCGAAGCTGTTCTGACAAATTTTACTCCGGATGTGCCAAATAGCATGTCAGGAAGACCAAGGCAGGAAGATGCTCAGGAATTTCTGAGCTTTGTATTGGATCAAATGCATGATGAATTGCTGAAGCTCGAAGGACAGTCTTCGAGTCTTAATGGGAGCAAGTCATCTCTAGTTTCCTATGCAGAAGATGATGAATGGGAAACCGTGGGTCCAAAAAATAAATCTGCCGTGACAAGGACTCAAAGCTTGGTTCCATCGCAATTAAGTGGTATTTTTGGAGGACAGCTCCAAAGTTTGGTGAAAGCTAAAGGGATTAGAGCCTCTGCCACTGGTCAGCCATATCTCTTGCTCCATCTTGACATTTATCCTGATGCTGTTCACACTATTGAGGATGCCCTGCACTTGTTTTCTGCACCAGAAACTCTTGAAGGGTACCGAACTGCAATAGCTGGAAAGGCTGGTGTTGTGACTGCAAGAAAATCTGTGCAGATACAGACTCTTCCAAAAATAATGATATTGCATCTGATGCGTTTTAGTTATGGAAGCCAAGGAAGCACTAAGTTGCATAAGCTTGTTCACTTTCCTCTCGAGCTGGTATTGGGTCGTGACTTGCTTGTTTCACCATCTACTGAGGGTCGAAGATATGAACTTGTTGCTACAATTACTCACCATGGTAGGGACCCTTCAAAGGGGCACTACACAGCTGATGCCCTATACCCTAATGGTCAGTGGCTACGATTTGATGATGCTTCTGTCTTTGCTATTGGAGCCAATAAGGTGCTGCATGATCAAGCATATGTCCTCTTCTACAAGCAGCATATGTGA 1611 0.4227 MSNSKVFVFGSFTEDETRSLLLKQSSGKVRNEKPVEKNQLQFGSVNVASIESSNLPNSRKAPSAPPSDSLKCNGVSSVRDNLPGASGTIKENGNIANCSIVPSSTVIVNEVKEYSGHSVPSLDEDVPSNQFTSLSLDASEAEGLNNVWKIGSGNGSSSKLFNQDSRKAPNGHIVAHVKDLLPRGLINSGNLCFLNATLQALLSCSPFVQLLQELRSRNIPKVGYPTLTAFTEFITQFDVPSTTKIKKDTDTFETGRPFCPTIFEAVLTNFTPDVPNSMSGRPRQEDAQEFLSFVLDQMHDELLKLEGQSSSLNGSKSSLVSYAEDDEWETVGPKNKSAVTRTQSLVPSQLSGIFGGQLQSLVKAKGIRASATGQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTAIAGKAGVVTARKSVQIQTLPKIMILHLMRFSYGSQGSTKLHKLVHFPLELVLGRDLLVSPSTEGRRYELVATITHHGRDPSKGHYTADALYPNGQWLRFDDASVFAIGANKVLHDQAYVLFYKQHM* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3669 536 SUPERFAMILY Cysteine proteinases 180 533 IPR038765 -
Aev04g3669 536 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 3 534 - -
Aev04g3669 536 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 183 535 IPR028889 -
Aev04g3669 536 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 184 199 IPR018200 GO:0004843|GO:0006511
Aev04g3669 536 Gene3D Cysteine proteinases 172 535 - -
Aev04g3669 536 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 3 534 - -
Aev04g3669 536 MobiDBLite consensus disorder prediction 53 74 - -
Aev04g3669 536 Pfam Ubiquitin carboxyl-terminal hydrolase 184 532 IPR001394 GO:0004843|GO:0016579
Aev04g3669 536 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 477 495 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3669 Aev-Chr4 34237500 34241816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3669 180 534 Miscellaneous Gene Families AT2G24640 29.752 1.08e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3669 K11841 - gmx:100799656 824.313