Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3664 ATGTCTCTACTAAGGCCAATTATCACACTTGTCATCGTTCTTTCTTCATTGTGCTTATGTTTTAGCTCTTGCATAGAGGAAAGACTTGATCATACAAATGCTGAACATTACCCTGTTCATGATGGAAGGTTTATAAAGAGAAAACAACATGAACATTTTGGTCTAATGATGAGGGCTAATAGATTTACCACTCATTCTTCAAGGTCTAGTGGAACAGTTAGTGTTGATGACTTTGGAGCCAAAGCTGATGGAAGAGATGATTCACAGGCATTTGGGAAGGCTTGGAATGAAGCATGTTCTAATGGGGCTACCCTTGTGGTACCTAAAAGAAGGACCTATACGCTTAAGCCAATTACATTTTCTGGTCCATGCCAACCCAATACTGCATTTATGATCTATGGAACAATCAAGGCATGGCCTCAAATGTCTGCATATGAAGATGACAGACAACATTGGATTGTATTCGACAGTGTCGCGAATTTCAGAGTTGATGGTGGAGGAACCTTCGACGGCAATGGGAAAAAATGGTGGCAAAATTCATGTAAAATAAATGAAAACCTTCCTTGCAAAGAAGCACCAACTGCTGTGACTTTCTACCAATGCAAGAATTTGAAAGTGCAAAATTTGAAGTTGAAAGATGCACAACAAATGCACTTGACCTTTAAGAGTTGCTTCAATGTTATTGCTTCAAATCTTGTTGTTAGAGCACCAGGGTATAGCCCTAACACTGATGGAATTCATGTAGCAGAAACACAAAATATTCTCATAAGCAACAGTGTGATTGGGACAGGTGATGACTGTATTTCAATAGTAAGTGGGTCCCAAAATGTTAGAGCTACAGATATTACATGTGGACCAGGACATGGAATCAGCATTGGAAGCTTAGGAGCTGATAATTCTGAGGCTCAAGTGTCCAATGTGGTAGTGAACAGAGCCACTCTAATAGGAACAAGTAATGGAGTGAGAATAAAGACTTGGCAGGGAGGTTCTGGTTATGCAAGAAACATCAAATTCTTGAACATAGTGATGCAGAATGTGACAAATCCAATAATAATAGATCAAAACTACTGTGATCAAGAGCAGCCATGCCAACAGAAGCATTCAGCAGTTCAATTAAGCAATGTATTATACCAAAACATCAGAGGAACAAGTGCCTCAGAAGTTGCCATAAAATTTGAGTGCAGCAGAACAGTCCCTTGCAGAGAAATCTATGTGCAGGATGTGGTTTTAGAGCCAGAATCTGAACAGTCCAACATAATAGAACTACCTTCAAAATCAAATAGTGGCCATCCGAAAGAGGAGAAGCTGACACAGCTGCACTTCTTCTACCACGACATCCTGAAAGGGGAAACCCCGACAGTGGTGCAAATAATCGAACCAAAAGGGAACACTCCGAACGGAATAGGAGCAACATTCATGATGGACAATGCGCTGACGGAGGGGCCGGAGCTGAGTTCTAAGGAGGTCGGGAGGGCGCAGGGGATGTTCGGTCTGGCATCGATCCACGACCGTGGGATGGTGATGCTGATCAACTTGGCGTTCAGTGAGGGCGAGTACGAAGGGAGCACGCTAAGCATGCTGGGGAGGAACCCTGTGCAGGACACGGTGAGGGAGATGCCTATTGTGGGAGGGACGGGGGTGTTCCGATTCGCACGTGGCTACGCTGTTGCTAAGAGCCTTTGGAGTATTTCATCGGATCAACATTTCGTGGTTGAGTACAATGTTACTGTCTCTCATCCTTATTAG 1746 0.433 MSLLRPIITLVIVLSSLCLCFSSCIEERLDHTNAEHYPVHDGRFIKRKQHEHFGLMMRANRFTTHSSRSSGTVSVDDFGAKADGRDDSQAFGKAWNEACSNGATLVVPKRRTYTLKPITFSGPCQPNTAFMIYGTIKAWPQMSAYEDDRQHWIVFDSVANFRVDGGGTFDGNGKKWWQNSCKINENLPCKEAPTAVTFYQCKNLKVQNLKLKDAQQMHLTFKSCFNVIASNLVVRAPGYSPNTDGIHVAETQNILISNSVIGTGDDCISIVSGSQNVRATDITCGPGHGISIGSLGADNSEAQVSNVVVNRATLIGTSNGVRIKTWQGGSGYARNIKFLNIVMQNVTNPIIIDQNYCDQEQPCQQKHSAVQLSNVLYQNIRGTSASEVAIKFECSRTVPCREIYVQDVVLEPESEQSNIIELPSKSNSGHPKEEKLTQLHFFYHDILKGETPTVVQIIEPKGNTPNGIGATFMMDNALTEGPELSSKEVGRAQGMFGLASIHDRGMVMLINLAFSEGEYEGSTLSMLGRNPVQDTVREMPIVGGTGVFRFARGYAVAKSLWSISSDQHFVVEYNVTVSHPY* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3664 581 PANTHER POLYGALACTURONASE 7 417 - -
Aev04g3664 581 Gene3D - 75 425 IPR012334 -
Aev04g3664 581 ProSitePatterns Polygalacturonase active site. 281 294 IPR000743 GO:0004650|GO:0005975
Aev04g3664 581 Gene3D - 426 577 IPR044859 -
Aev04g3664 581 SUPERFAMILY Pectin lyase-like 67 415 IPR011050 -
Aev04g3664 581 SMART pbh1 251 272 IPR006626 -
Aev04g3664 581 SMART pbh1 224 250 IPR006626 -
Aev04g3664 581 SMART pbh1 304 325 IPR006626 -
Aev04g3664 581 SMART pbh1 333 354 IPR006626 -
Aev04g3664 581 Pfam Dirigent-like protein 437 577 IPR004265 -
Aev04g3664 581 Pfam Glycosyl hydrolases family 28 103 420 IPR000743 GO:0004650|GO:0005975
Aev04g3664 581 PANTHER - 7 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3664 Aev-Chr4 34194354 34198431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3664 7 416 Glycoside Hydrolase AT3G07970 57.074 1.67e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3664 K01184 - gmx:732596 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3664 04 34194354 34198431 Aev10g0284 10 3083971 3086902 PCT