Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev04g3622 | ATGAGGAGGAATTTGGTTGAGGATCGGCTTAAGACCACTGATGAAGGACATGATTGGAATGAGTTGTTTGGATTAGGGACCGGGCTCACTGTTGAAATCGTTGATGATAAGCAAGTACTCTGCCCTAAGCTGAATGTGATATTCTTCGTTCTTACTATACTACATCACTTCACCCTATTGGCGCCGGCACCACCCTCTCTCTCTCTCTCTCTAGGTCACGGTGGTTCTAGCGGCGGAGCTTCTTCATTCCTCCGGCGAGCAGATTCACGATTCCGATTAGCTCTAATGGCGGAGGATCGAAAGGCTCCGAAGCTTCCGGTGGAAGGGAAGCGCAACATCCTCATTACCAGCGCCTTGCCTTACGTCAACAACGTCCCTCACCTCGGCAACATCATTGGATGTGTGTTGAGTGCTGATGTGTTTGCACGGTACTGTCGCCTTCGCGGTTACAATGCTATCTACGTTTGCGGTACTGATGAGTATGGCACTGCAACAGAGACTAAGGCTATGGAAGAGAATTGCTCCCCTAAAGAGATTTGTGACAAATATCATGCTATTCACAAGGAGATCTATGATTGGTTCGATATTAGTTTTGATGAATTTGGGCGCACATCATCCCCACAGCAAACTGAAGTTTGCCAAGCAATTTTCAAAAAATTGTTGGATAACAAATGGCTCTCAGAGAACACAATGCAGCAGCTTTACTGTGACACATGCAAAAGGTTCTTAGCTGATCGGCTTGTGGAGGGTACCTGCCCCACTCCTGGGTGTGATTATGGTTCCGCTCGAGGAGATCAATGTGAACATTGTGGGAAGCTTCTAAATCCAACTGAATTAAAAGATCCCAGGTGCAAGGTTTGTAAAAATACTCCACGAATTCGTGACACTGACCACTTGTTTCTTGAACTTCCCCTGTTGAGGGAAAGATTGGAAAAATACATAAACGAGATGTCAGTGGTAGGATTATGGAGTCAGAATGCTATCCAAACAACATATTCATGGCTTAAAGAGGGATTAAGGCCTCGTTGTATTACCAGGGATCTGAAGTGGGGGGTTCCTGTTCCACATGAAAAATACAGTGACAAGGTTTTCTATGTATGGTTTGATGCACCTATTGGATATGTCTCAATCACTTCGTGCTACACAAATGATTGGGAGAAATGGTGGAAAAACCCAGAGAATGTGGAGTTGTATCAGTTTATGGGCAAGGATAATGTGCCTTTCCACACTGTTATGTTTCCATCTACTCTACTTGGAACCGGTGAAAGCTGGACTTTGATGAAGACTATTAGTGTTACTGAGTACTTAAATTATGAATCGGGTAAGTTTTCTAAAAGCAAAGGACAAGGAGTTTTTGGTAATGATGCAAAGGATACTAATATTCCAGTTGAAGTATGGAGATATTACTTGCTCACAAATAGGCCTGAGGTATCAGATACACTATTTACATGGCGTGACTTGCAAGCAAAGTTAAATAGCGAGCTGCTGAGTAATTTGGGCAACTTCATCAACCGAGTCTTGAGTTTTATTGCTAAACCTGAAGGTCAAGGATATGATTCCATGATTCCTGATGTTGCTGATGATGTAAGTAGTGACTCCCATGCTCCAACAAAAAAATTGGCTGAAAGAGTTTCTGCATATCTGGAGCAGTACATAGAAGCCATGGAGAAGGTTAAACTGAAGCAAGGATTGAAAAGTGCAATGAGCATATCTAGTGAGGGGAATGGATATCTGCAGGAAAGTGAATTTTGGCGCCTTTACAAAGAAAATAAACCACTTTGCTCCCTTGTTATGAAAACTGCAGTTGGGGTTGTATATATTCTTGCATGTTTGTTGGAACCTTTTATGCCTTCTTTCACTCTTGAGGTATTTAAGCAGCTAAATTTGTCTGCGGAGTTGCATCTTTCTCTTTGTGATGAAAAGGGGGACATTAATAAGGCAAAAAGACCTTGGGAAATCATAAATGCAGGCCATAAAATTGGGAAACCCCAGCCACTGTTCAAGGAACTGAAAGATGAAGAAGTGGAGTTCTTCAGTGAGAAATTTGCCGGAAGTCAAGCTGATAGGATTTCACGTGCACAGAATGCTAAAGTTGACAATGCTGCTGAGCAACTGAAGAAAACAAAAATCTCAGATGGAAAAGGAAAGAAAAAAAGCATCAGGCAAATCTCTAATGAGCCTAAAGTCAAGGCTGCTTCTTCTGAACAAGAGATTACCATCACAAGGCTTGATATTAGGGTTGGCCTTATTAAGAAAGCTCAAAAACATCCTGATGCTGATTCACTGTATGTAGAAGAGATTGATGTTGGTGAAGACCAGCCCAGAACAGTTGTCAGTGGGCTTGTCAAGTATATACCACTCGATGAAATGCAGAACCGAAAGGTCTGTGTTCTCTGCAACCTAAAGCCGGCGACCATGAGGGGCATTAGATCCCAAGCAATGGTTCTTGCTGCCTCCAATAATGATCACACCAAGGTCGAGTTGGTCGAGCCACCGAGTTCTGCGAATGTTGGAGAAAGAGTTTCATTCCCAGGGTTTGAAGGTGATCCTGATGAACTCTTAAACCCAAAGAAGAAAGTTTGGGAAACATTGCAAGTGGATCTGCACACTAACGATGAACTAGTTGCTTGCTACAAGGATATTCCACTCACCACTTCTGCTGGAATTTGCAAGGTCTCATCCATACAAAATGGATCAATTAGGTAG | 2706 | 0.4283 | MRRNLVEDRLKTTDEGHDWNELFGLGTGLTVEIVDDKQVLCPKLNVIFFVLTILHHFTLLAPAPPSLSLSLGHGGSSGGASSFLRRADSRFRLALMAEDRKAPKLPVEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYVCGTDEYGTATETKAMEENCSPKEICDKYHAIHKEIYDWFDISFDEFGRTSSPQQTEVCQAIFKKLLDNKWLSENTMQQLYCDTCKRFLADRLVEGTCPTPGCDYGSARGDQCEHCGKLLNPTELKDPRCKVCKNTPRIRDTDHLFLELPLLRERLEKYINEMSVVGLWSQNAIQTTYSWLKEGLRPRCITRDLKWGVPVPHEKYSDKVFYVWFDAPIGYVSITSCYTNDWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGESWTLMKTISVTEYLNYESGKFSKSKGQGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWRDLQAKLNSELLSNLGNFINRVLSFIAKPEGQGYDSMIPDVADDVSSDSHAPTKKLAERVSAYLEQYIEAMEKVKLKQGLKSAMSISSEGNGYLQESEFWRLYKENKPLCSLVMKTAVGVVYILACLLEPFMPSFTLEVFKQLNLSAELHLSLCDEKGDINKAKRPWEIINAGHKIGKPQPLFKELKDEEVEFFSEKFAGSQADRISRAQNAKVDNAAEQLKKTKISDGKGKKKSIRQISNEPKVKAASSEQEITITRLDIRVGLIKKAQKHPDADSLYVEEIDVGEDQPRTVVSGLVKYIPLDEMQNRKVCVLCNLKPATMRGIRSQAMVLAASNNDHTKVELVEPPSSANVGERVSFPGFEGDPDELLNPKKKVWETLQVDLHTNDELVACYKDIPLTTSAGICKVSSIQNGSIR* | 902 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev04g3622 | 901 | CDD | Anticodon_Ia_Met | 491 | 627 | IPR041872 | - | |
| Aev04g3622 | 901 | Gene3D | - | 497 | 669 | - | - | |
| Aev04g3622 | 901 | Gene3D | - | 738 | 901 | IPR012340 | - | |
| Aev04g3622 | 901 | MobiDBLite | consensus disorder prediction | 709 | 724 | - | - | |
| Aev04g3622 | 901 | CDD | tRNA_bind_EMAP-II_like | 738 | 842 | - | - | |
| Aev04g3622 | 901 | SUPERFAMILY | Nucleic acid-binding proteins | 740 | 900 | IPR012340 | - | |
| Aev04g3622 | 901 | MobiDBLite | consensus disorder prediction | 709 | 728 | - | - | |
| Aev04g3622 | 901 | CDD | MetRS_core | 112 | 482 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | Hamap | Methionine--tRNA ligase [metG]. | 111 | 681 | IPR023458 | GO:0004825 | |
| Aev04g3622 | 901 | PANTHER | METHIONINE--TRNA LIGASE CYTOPLASMIC | 101 | 901 | - | - | |
| Aev04g3622 | 901 | SUPERFAMILY | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 499 | 682 | IPR009080 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Aev04g3622 | 901 | Pfam | Putative tRNA binding domain | 745 | 839 | IPR002547 | GO:0000049 | |
| Aev04g3622 | 901 | PANTHER | METHIONINE--TRNA LIGASE | 101 | 901 | IPR023458 | GO:0004825 | |
| Aev04g3622 | 901 | SUPERFAMILY | Nucleotidylyl transferase | 110 | 494 | - | - | |
| Aev04g3622 | 901 | Gene3D | HUPs | 112 | 495 | IPR014729 | - | |
| Aev04g3622 | 901 | ProSiteProfiles | tRNA-binding domain profile. | 739 | 842 | IPR002547 | GO:0000049 | |
| Aev04g3622 | 901 | SUPERFAMILY | Methionyl-tRNA synthetase (MetRS), Zn-domain | 248 | 284 | IPR029038 | - | |
| Aev04g3622 | 901 | Pfam | Anticodon binding domain of methionyl tRNA ligase | 537 | 686 | IPR041872 | - | |
| Aev04g3622 | 901 | ProSitePatterns | Aminoacyl-transfer RNA synthetases class-I signature. | 120 | 131 | IPR001412 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Aev04g3622 | 901 | Gene3D | - | 248 | 284 | IPR029038 | - | |
| Aev04g3622 | 901 | TIGRFAM | metG: methionine--tRNA ligase | 113 | 651 | IPR014758 | GO:0000166|GO:0004825|GO:0005524|GO:0006431 | |
| Aev04g3622 | 901 | Pfam | tRNA synthetases class I (M) | 113 | 507 | IPR015413 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 364 | 375 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 399 | 414 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 196 | 207 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 148 | 162 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 494 | 505 | IPR033911 | GO:0004825|GO:0006431 | |
| Aev04g3622 | 901 | PRINTS | Methionyl-tRNA synthetase signature | 115 | 128 | IPR033911 | GO:0004825|GO:0006431 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev04g3622 | Aev-Chr4 | 33963684 | 33971376 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev04g3622 | K01874 | - | gmx:100809861 | 1417.91 |