Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3578 ATGAACAAGCTCTTTCGATCCTCACTCAGAACCCAGGTTTCTAGGAGTTTTCATGAAAATTTTCCTCAGTTTGCCGCGTGGTCTAGATTAAATAGTTCAAGTTCTTCTTTGGCGAAGGACAATTCTGCTACTAATGAAGGGTTCAAGGGCCATGATATGCTTGCCCCTTTCACAGCTGGGTGGCAGAGTACCGATTTGCATCCTTTAGTTATAGAAAAGTCAGAGGGAAGCTATGTATATGACCATAATGGGAAGAAATATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGCAATGAGCCACGTCTGGTTGAAGCTGCCACAACACAATTGAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACTACAAAACCTTCTTTGGATCTAGCCAAGGACCTCCTAGAAACTTTCACAGCAAGAAAAATGGCAAAAGCGTTTTTTGTAAATAGTGGATCAGAAGCAAATGACACTCAGGTGAAACTTGTATGGTATTACAACAATGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCATATCATGGTTCAACATTGATAGCAGCCAGTCTTTCTGGCCTTCCAGCATTGCACCAGAAATTTGATCTGCCAGCTCCTTTTGTCTTGCACACTGACTGTCCACATTACTGGCGGTATCATCTTCCAGGAGAGACAGAGGAAGAGTTTTCAACTAGATTAGCCAAAAATTTAGAGGAGCTGATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATTGCTGAACCAGTGATGGGGGCAGGAGGTGTGATACCTCCACCAGCAACTTATTTTGAAAAGATCCAAGCCGTTGTAAAAAAATATGACATTCTTTTCATTGCGGATGAGGTGATATGTGCATTTGGAAGGCTTGGGACAATGTATGGGTGTGACAAGTACAACATTAAGCCTGACCTTGTCTCCTTAGCTAAGGCACTGTCTTCTGCATATATGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCAGATGTTATACACTCACAGAGCAACAAGCTTGGTTCATTTTCCCATGGGTTTACTTATTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTCAAGATCTACAAAGAAAGAAATATTGTTGAGCAGGTGAGAAAAATCTCTCCAAGGTTCCAAGATGGTGTAAAAGCTTATTCTGACAGTCCTATCATCGGAGAGATACGAGGAACTGGCTTGATTCTTGGTACTGAGTTCACCGACAATAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTAGGTGCCTACTTTGGAGCACAATGTGAGAAGCATGGCATGTTAGTTCGTGTAGCTGGAGATAACATCATGATGTCTCCACCGTTCATTATTTCCCCTCAAGAAGTTGATCAGTTAATCAGCATTTATGGGGAGGCTCTAAAAGAAACAGAGAAGAGGGTGGAGGAGCTCAAGTCTCAGAGGAAGTAG 1503 0.4265 MNKLFRSSLRTQVSRSFHENFPQFAAWSRLNSSSSSLAKDNSATNEGFKGHDMLAPFTAGWQSTDLHPLVIEKSEGSYVYDHNGKKYLDSLAGLWCTALGGNEPRLVEAATTQLKKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLAKNLEELILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEVSDVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVRKISPRFQDGVKAYSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPFIISPQEVDQLISIYGEALKETEKRVEELKSQRK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3578 500 Gene3D Aspartate Aminotransferase, domain 1 69 485 IPR015422 GO:0003824
Aev04g3578 500 Pfam Aminotransferase class-III 67 483 IPR005814 GO:0008483|GO:0030170
Aev04g3578 500 SUPERFAMILY PLP-dependent transferases 54 487 IPR015424 -
Aev04g3578 500 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 21 496 - -
Aev04g3578 500 PIRSF Transaminase_4ab_Lys_Orn 59 488 IPR005814 GO:0008483|GO:0030170
Aev04g3578 500 Gene3D - 103 385 IPR015421 GO:0003824
Aev04g3578 500 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 21 496 - -
Aev04g3578 500 Coils Coil 478 500 - -
Aev04g3578 500 CDD OAT_like 63 485 IPR005814 GO:0008483|GO:0030170
Aev04g3578 500 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 293 330 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3578 Aev-Chr4 33695423 33701126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3578 K16871 - gmx:100815181 887.871