Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3565 ATGGAAGCTGTATTGTTCGCAGCCAAACCAGCTTCCCACCTCAAACTCCCTCCGCCTACTCCCAAACACGCCTTCCCTTCCAATCAATTCCCCTTTCGCCACAAACCAACTCACTTTCCAACCCTCTCCGCACTCCAAAACCAACAACAACAACAACCACCGCCACCGGAAAACACCGCCGTCGAAGATGAGTCCTACGGTGAGGTCAGCAAAATCATCGGAAGCCGCGCTCTTCCAGGAGCTACTGGCATGGAGTACCTCATAGAGTGGAAAGACGGCCACGCACCTTCCTGGCTCTCCGGTGACTTCATCGCCAAGGACGTCCTTTCCGAGTACGAGTCTCCCTGGTGGACCGCCGCTAAAAAAGCCGATGATGCTGCCCTCCGCCGCATCCTCGACTCCGACGATGGCCGTGACGTGAACGCCGTCGACTCTGACGGACGCACCGCGATCCACTTCGTCTCCGGACTCGGTTCCGAGCCCTGCGTCAAAATCTTAGCTGAATCCGGCACCGATGTAAACCACCGCGACAACGCCGGAGGACTCACGGCGCTGCACATGGCGGCGGGGTACGTTAAACCCGGCGTGGCGAAGCTGCTTCTCGATTTCGGTGCAGATCCGGAGATTGCAGACGATCAAGGACGAACGCCATTGGATCTGGCGCGTGAGCTTCTGAAAGCAACGCCGAAGGGGAATCCGATGCAGTTCGGGAGGAGGATTGGTTTGGAAGGTGTGGTTAGGGTTTTGGAAGGTGCGATTTTCGAGTACGCGGAGGTGGAGGAGATTTTGGAGCGGAGGGGGAAGGGTGAGAATTTGGAGTATCTTGTGCGGTGGAAGGACGGTGGCGCGAACGAGTGGGTGAAGGCGAGGTTCGTGGCGGAGGATCTGGTGAGGGACTACGAGGCGGGCCTGGAGTACGCGGTGGCGGAGGCGGTGGTTGCGAAGAGGGTTGGGGATGAGGGAAAGCCCGAGTTTTTGGTTAAGTGGGCCGATATGGATGAGCCCACTTGGGAGCCCATGGAGAATGTGGATCCTGAGCTCGTTAAGGAGTTCCAGTTGAGTAATATTACTAATAGTAATGGCCAGGCCCAGCAAAGTAATGGGCCTGCTGTAGTATTTTCGAATCAAGATAGCCCTTGA 1140 0.5684 MEAVLFAAKPASHLKLPPPTPKHAFPSNQFPFRHKPTHFPTLSALQNQQQQQPPPPENTAVEDESYGEVSKIIGSRALPGATGMEYLIEWKDGHAPSWLSGDFIAKDVLSEYESPWWTAAKKADDAALRRILDSDDGRDVNAVDSDGRTAIHFVSGLGSEPCVKILAESGTDVNHRDNAGGLTALHMAAGYVKPGVAKLLLDFGADPEIADDQGRTPLDLARELLKATPKGNPMQFGRRIGLEGVVRVLEGAIFEYAEVEEILERRGKGENLEYLVRWKDGGANEWVKARFVAEDLVRDYEAGLEYAVAEAVVAKRVGDEGKPEFLVKWADMDEPTWEPMENVDPELVKEFQLSNITNSNGQAQQSNGPAVVFSNQDSP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3565 379 PANTHER HOMEOBOX PROTEIN WARIAI 6 363 - -
Aev04g3565 379 Pfam Chromo (CHRromatin Organisation MOdifier) domain 309 352 IPR023780 -
Aev04g3565 379 ProSiteProfiles Chromo and chromo shadow domain profile. 307 363 IPR000953 -
Aev04g3565 379 SUPERFAMILY Chromo domain-like 62 116 IPR016197 -
Aev04g3565 379 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 6 363 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Aev04g3565 379 ProSiteProfiles Ankyrin repeat profile. 146 178 IPR002110 GO:0005515
Aev04g3565 379 Gene3D - 303 353 - -
Aev04g3565 379 SUPERFAMILY Chromo domain-like 305 352 IPR016197 -
Aev04g3565 379 ProSiteProfiles Ankyrin repeat region circular profile. 146 178 - -
Aev04g3565 379 SUPERFAMILY Chromo domain-like 255 302 IPR016197 -
Aev04g3565 379 Pfam Ankyrin repeats (many copies) 170 221 IPR002110 GO:0005515
Aev04g3565 379 MobiDBLite consensus disorder prediction 355 379 - -
Aev04g3565 379 ProSiteProfiles Ankyrin repeat profile. 180 212 IPR002110 GO:0005515
Aev04g3565 379 Gene3D - 111 252 IPR036770 -
Aev04g3565 379 MobiDBLite consensus disorder prediction 45 65 - -
Aev04g3565 379 SUPERFAMILY Ankyrin repeat 112 223 IPR036770 -
Aev04g3565 379 ProSiteProfiles Ankyrin repeat region circular profile. 180 212 - -
Aev04g3565 379 SMART chromo_7 306 356 IPR000953 -
Aev04g3565 379 SMART chromo_7 65 117 IPR000953 -
Aev04g3565 379 SMART chromo_7 255 305 IPR000953 -
Aev04g3565 379 CDD CD2_cpSRP43_like 255 302 - -
Aev04g3565 379 Gene3D - 253 302 - -
Aev04g3565 379 Gene3D - 63 110 - -
Aev04g3565 379 ProSiteProfiles Chromo and chromo shadow domain profile. 257 286 IPR000953 -
Aev04g3565 379 SMART ANK_2a 146 175 IPR002110 GO:0005515
Aev04g3565 379 SMART ANK_2a 111 142 IPR002110 GO:0005515
Aev04g3565 379 SMART ANK_2a 180 209 IPR002110 GO:0005515
Aev04g3565 379 CDD CD3_cpSRP43_like 304 353 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3565 135 221 Acyl Lipid Metabolism Gene Families AT5G53470 37.931 5.82e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3565 K12271 - gmx:100818382 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3565 04 33619276 33620415 Aev04g3565 04 33619276 33620415 ECH