Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3562 ATGGAGACAAGATCAGCAGGAGGATCAAGTAATAGGAGGAAAAGTGGAGGAAATGGACAGGTCCTAGACGGTTCGAATATAATGGAGTTGGTTGGGAATGAACAAGTATTCAGCAGTTTCGTGGAGCATAAGTTTCAAGAGCTGGACAGAGACAGAGATGGGCAGCTTTCTGTGAAGGAGCTTCAGCCTGCTGTTGCTGATATTGGTGCTGCTCTTGGCTTGCCTGCTCAGGGCACTAACCCTGATTCTGATCACATCTACTCTGAGGTGTTGAATGAATTCACACATGGGAAGCAAGAAAAAGTGAGCAAGACAGAGTTCAAAGAGGTTCTCTCAGACATTCTTCTAGGAATGGCCGCAGGACTAAAGCGAGACCCTATTGTGATACTTAGAATTGATGGTGAAGATCTTCTTGAGTTTGTTAATGGTCCAAGTTTTGAAGCAGAAATGGCTTCCATATTCTCTCAGATTGAATCCCCTGAAAAATCACTTGCTGATCACATAATTTTTGCTCTTGCTAAACTCACTGTTGATCAAGGAATTCCTCCTACATCAGATACTTGGGTATTTGACAACATTGTGAAACCAGCACTGGTGTCTCAAGATTTGGATAAGGCTGTTACTAATCAAGAGACATTTTTGGAGGAATTCAAGAGAGTTGCATTGAGTGTTGCTGATCGCCTTAAGGAGCAACCTGTCATTGTTGCACACAGTGAAAACACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTTGACAAGACTCTGAACTCAGCAGTAGAGAATTTGCCTAAAGATAAAAATGGAAAGATTTCAAAGGAGTATCTAAGGCTGGCTCTAGACACTGTGTCTCCATCTGCTGGTTTACCACCACTTGGTGCAATTGAAGAGATGGATAAAGTTATTGGTGGAGTCTTCACAATGGTGAATGCAGATGATGCAAAGGCTGTTAAAGAGGATGAATTCAAGAAAAGTTTGACTGAGATATTAGGGAGCATTATGTTGCAGTTGGAGGGAAATCCAATATCAGTTTCATCAAATTCAGTGGTTCATGAGCCTCTTGGTTCACCTTCTACACTTCTGAAGCCACCTTCTAATGAAACACCAGCATAA 1128 0.4167 METRSAGGSSNRRKSGGNGQVLDGSNIMELVGNEQVFSSFVEHKFQELDRDRDGQLSVKELQPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGPSFEAEMASIFSQIESPEKSLADHIIFALAKLTVDQGIPPTSDTWVFDNIVKPALVSQDLDKAVTNQETFLEEFKRVALSVADRLKEQPVIVAHSENTFDGSGVKRLLSNKFEFDKTLNSAVENLPKDKNGKISKEYLRLALDTVSPSAGLPPLGAIEEMDKVIGGVFTMVNADDAKAVKEDEFKKSLTEILGSIMLQLEGNPISVSSNSVVHEPLGSPSTLLKPPSNETPA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3562 375 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g3562 375 ProSiteProfiles EF-hand calcium-binding domain profile. 256 291 IPR002048 GO:0005509
Aev04g3562 375 Pfam EF-hand domain pair 43 110 IPR002048 GO:0005509
Aev04g3562 375 SUPERFAMILY EF-hand 42 345 IPR011992 -
Aev04g3562 375 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g3562 375 Gene3D - 41 333 - -
Aev04g3562 375 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Aev04g3562 375 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Aev04g3562 375 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 6 373 - -
Aev04g3562 375 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 6 373 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3562 20 373 EF-hand Containing Proteins AT4G38810 69.359 1.69e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3562 - - gmx:100820516 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3562 04 33597629 33601497 Aev04g3562 04 33597629 33601497 ECH