Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3559 ATGGGAGATGAAGGTATTTTGAGAGGTGTCCCCAAGCATGCCAACCCTGGGAAGGCTACAGTATTGGCTCTTGGCAAGGCATTCCCACACCAACTTGTCATGCAAGAATATTTAGTTGATGGATACTTCAGAGACACTAACTGTGACAATCTTGAGCTAAAGCAGAAGCTTAGTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTACGTGGTGATGTCTGAGGAGATACTTAAAAAGTACCCAGAACTTGCAGTTGAAGGCCTCCCAACTGTAAAACAAAGGCTAGAGATCTGTAACAAGGCAGTGACACAAATGGCCATTGAAGCCTCACAGGTTTGCATCAAGAACTGGGGTAGATCTTTGTCAGACATAACACACTTGGTTTATGTCTCATCCAGTGAAGCTAGGTTACCTGGTGGTGACCTTTACTTAGCCAGAGGACTAGGACTCAGCCCTTCCACTCAGAGAGTCTTGCTCTATTTTGCGGGTTGCTCTGGAGGTGTTGCTGGATTACGTGTCGCAAAGGACATAGCTGAGAACAACCCTGGTAGTAGGGTGCTTCTTGCTACTTCTGAGACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCCTATGATCTTGTGGGGGTGGCACTTTTTGGTGATGGTGCTGGTGCCATGATAGTAGGAACAGACCCTATTGTGGGAACTGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTCTGCCAGACACTGAGAAGAAGATTGATGGGAGATTGACTGAGGAAGGGATAAGCTTCAAGTTAGCAAGGGAACTTCCTCAGATAATTGAGGACAATGTTGAGGGATTCTGTGAGAAATTAATGGGTGTTGTTGGGTTCCAGAACAAGGATTACAACAAGCTGTTCTGGGCTGTGCATCCCGGTGGCCCCGCGATCTTGAACCGAATAGAGAAGAGGCTTGATTTGTTGCCAGAGAAGTTGAATGCAAGTAGAAGGGCTTTGATGGATTATGGAAATGCTAGCAGCAATACAATTGTGTATGTGCTAGAGTACATGATAGAAGAGGCCAAGAAGATCAGGAACGATGGTGAAGATGATCCTGAATGGGGCTTGATGCTTGCTTTTGGACCTGGGATTACTTTTGAGGGAATTCTAGCCAGGAATCTGTGTGATTGA 1176 0.4583 MGDEGILRGVPKHANPGKATVLALGKAFPHQLVMQEYLVDGYFRDTNCDNLELKQKLSRLCKTTTVKTRYVVMSEEILKKYPELAVEGLPTVKQRLEICNKAVTQMAIEASQVCIKNWGRSLSDITHLVYVSSSEARLPGGDLYLARGLGLSPSTQRVLLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIVGTDPIVGTEKPLFELHTAVQEFLPDTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCEKLMGVVGFQNKDYNKLFWAVHPGGPAILNRIEKRLDLLPEKLNASRRALMDYGNASSNTIVYVLEYMIEEAKKIRNDGEDDPEWGLMLAFGPGITFEGILARNLCD* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3559 391 PANTHER TYPE III POLYKETIDE SYNTHASE B 14 389 - -
Aev04g3559 391 Gene3D - 8 236 IPR016039 GO:0016746
Aev04g3559 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 14 389 IPR011141 GO:0009058|GO:0016747
Aev04g3559 391 CDD CHS_like 19 385 - -
Aev04g3559 391 SUPERFAMILY Thiolase-like 236 387 IPR016039 GO:0016746
Aev04g3559 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
Aev04g3559 391 Gene3D - 237 388 IPR016039 GO:0016746
Aev04g3559 391 SUPERFAMILY Thiolase-like 15 232 IPR016039 GO:0016746
Aev04g3559 391 Pfam Chalcone and stilbene synthases, N-terminal domain 13 229 IPR001099 -
Aev04g3559 391 PIRSF PKS_III 8 390 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3559 Aev-Chr4 33589054 33590360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3559 87 376 Miscellaneous Gene Families AT4G34250 26.168 9.51e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3559 - - vun:114168705 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3559 04 33589054 33590360 Aev04g3559 04 33589054 33590360 ECH