Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev04g3550 | ATGGAAGTGACATGGTTGAGTGCCCTTCTTGTTGGGGCTGGTTACCTTGCTATTGGTTACTTCATTGGTTCCAAATACCCTCTTCGTTTCTTATTCTCTGCTAAACTCGCGAAACACCTCAGTGATAACACCAACACTAACACTAATAATAAGTCCAAAGCCAAAGCGCCCCTTGAGATTGAACAGCTCGCTAACATTCTCGATGATTTCAAAATGGTATTGGTGGTTAGGAATGATCTTAAAATGGGTAAAGGGAAGATTGCTGCTCAATGCAGCCATGCAACTTTAGGTCTATATAAGAAGGTCCTTTATCGAGCACCAAAGGCTTTGAATAGGTGGGAGATGTGTGCACAGCCTAAGGTTGTTGTGAAAATTGAAAGTGAAGAAGATATGCTAGCTTTGCAAGAAAGGGCTAAATCTCTTAAGTTACCCACCCATATCACAATTGATGCTGGGAGAACACAGATTGCACCAAATTCCAGAACTGTGATGGCAATTCTTGGGCCTGTTGAAGTGGTAGATGATGTAACTGGTGGACTGAAACTACTGTAG | 552 | 0.4221 | MEVTWLSALLVGAGYLAIGYFIGSKYPLRFLFSAKLAKHLSDNTNTNTNNKSKAKAPLEIEQLANILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLYRAPKALNRWEMCAQPKVVVKIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL* | 184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev04g3550 | 183 | TIGRFAM | arch_pth2: peptidyl-tRNA hydrolase | 71 | 183 | IPR002833 | GO:0004045 | |
| Aev04g3550 | 183 | SUPERFAMILY | Peptidyl-tRNA hydrolase II | 68 | 183 | IPR023476 | - | |
| Aev04g3550 | 183 | Pfam | Peptidyl-tRNA hydrolase PTH2 | 70 | 183 | IPR002833 | GO:0004045 | |
| Aev04g3550 | 183 | CDD | PTH2 | 70 | 183 | IPR002833 | GO:0004045 | |
| Aev04g3550 | 183 | Gene3D | Bit1 | 68 | 183 | IPR023476 | - | |
| Aev04g3550 | 183 | PANTHER | OSJNBA0060D06.11 PROTEIN | 3 | 183 | - | - | |
| Aev04g3550 | 183 | PANTHER | PEPTIDYL-TRNA HYDROLASE 2 | 3 | 183 | IPR002833 | GO:0004045 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev04g3550 | Aev-Chr4 | 33519357 | 33521374 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev04g3550 | K04794 | - | gmx:100527794 | 299.286 |