Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3546 ATGGTCCCACCGGCGGTGCAATCACCGAACCCTCAACTAACCCTACAATTCCTCAGCTCTGTCCTCTCCCAGCGTGGCCCCTCCGCACTCCCTTACTCCGAAGACACAAAGTGGCTAATCCGTCAGCACCTCGTTGCCCTCACCACCACGTACCCGTCGCTGGAGCCCAAAACGGCGACCTTCACCCACAACGACGGCCGTTCCGTCAACCTCCTCCAAGCAGACGGCACCATCCCGATGTCGTTTCAGGGCGTAACGTACAACATCCCTGTCCTCATCTGGCTCATGGAGTCTTACCCTCGCCACCCTCCTTGCGTCTACGTTAACCCCACCAGGGACATGATCATCAAGCGCCCCCACGCTCATGTTAACCCTTCTGGCCTTGTTTCTGTCCCTTACTTGCAGGATTGGATCTACCCTAGTTCCAATCTCGTCGATCTCGCCAGAAACTTGAGCCTTGTTTTTGGTCGTGACCCTCCTCTCTATTCCCAGCGTAGGAATCCCCCACCTCCTGTTTCAAACCAAAACCTTAATCCCAATCCAAATTTTGGAACTTTATCGTCGAATTTGGGGAATTCCTCTTCTGGGTATGTGCAGCAGCATCACCATATTCCGCCTCCTAGGAGTTACCCTCCTTCGCCTTATGGTAGTGTTGGTGGTGGTGGTGGTGGTTCTTCTAGGGTTCAGAATTTGTCTAATACTGAGGATCCGGGTGAGGTGTTTAAGAGGAATGCTGTGAATAAGATTGTGGAGATGGTGCACGGTGATGTTACTGCTTTGAGGAAGACTAGGGAGGCTGAGATGGAGGGTTTGTTTAACCTTCAGGGTGTGTTGAAGCAGAGGGAGGAGGGTCTCAACAAGGGTTTGAAGGAGATGCAGGAGGAGATGGAGGGTTTGGAGCAGCAGTTGCAGATGGTTTTGATGAACACTGATGTTCTTGAGGGTTGGTTGAGGGATAATCAAGGTAAGAGGGTGGGGAATTTGGAGAATGTTGAGGATGCTTTCGAGTGTGCTGATGTGCTTTCCAAACAGATGCTTGATTGCACTGCTGCTGATTTGGCTATTGAGGATACTCTTTATGCATTGGATAAGGCTGTTCAGGTTGGGGCCGTGCCGTTCGATCAGTACTTGAGGAGTGTGAGGGCACTGTCTAGAGAGCAGTTCTTTCATCGAGCGACAGCCGCGAAGGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTACTAGGATTCAACATTATACTAGCTGA 1257 0.5131 MVPPAVQSPNPQLTLQFLSSVLSQRGPSALPYSEDTKWLIRQHLVALTTTYPSLEPKTATFTHNDGRSVNLLQADGTIPMSFQGVTYNIPVLIWLMESYPRHPPCVYVNPTRDMIIKRPHAHVNPSGLVSVPYLQDWIYPSSNLVDLARNLSLVFGRDPPLYSQRRNPPPPVSNQNLNPNPNFGTLSSNLGNSSSGYVQQHHHIPPPRSYPPSPYGSVGGGGGGSSRVQNLSNTEDPGEVFKRNAVNKIVEMVHGDVTALRKTREAEMEGLFNLQGVLKQREEGLNKGLKEMQEEMEGLEQQLQMVLMNTDVLEGWLRDNQGKRVGNLENVEDAFECADVLSKQMLDCTAADLAIEDTLYALDKAVQVGAVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMATRIQHYTS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3546 418 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Aev04g3546 418 Coils Coil 282 309 - -
Aev04g3546 418 SUPERFAMILY Endosomal sorting complex assembly domain 339 399 IPR037202 -
Aev04g3546 418 Gene3D - 340 400 - -
Aev04g3546 418 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 4 417 - -
Aev04g3546 418 MobiDBLite consensus disorder prediction 161 237 - -
Aev04g3546 418 MobiDBLite consensus disorder prediction 223 237 - -
Aev04g3546 418 Pfam Vps23 core domain 333 396 IPR017916 -
Aev04g3546 418 ProSiteProfiles Steadiness box (SB) domain profile. 339 407 IPR017916 -
Aev04g3546 418 PANTHER PROTEIN ELC-LIKE 4 417 - -
Aev04g3546 418 MobiDBLite consensus disorder prediction 177 200 - -
Aev04g3546 418 SUPERFAMILY UBC-like 24 161 IPR016135 -
Aev04g3546 418 Gene3D Ubiquitin Conjugating Enzyme 5 162 IPR016135 -
Aev04g3546 418 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3546 K12183 - gmx:100778834 611.298