Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3543 ATGCAGGGAACAGCAACGGGTTGTTACAAGTGTGGGAGGCCAGGGCACTGGTCACGTGACTGCCCTTTCTCCGCCCCAAATTCCAACCCTGATTCCGCCGCCGATCCTACTCCTTCTCGTCCTTCTTCTTCTTTCAAACCTTCTTCCTCCGGTGGTGGCGGAACCAGATCCGCCGCCGCAACTGCTTCAAAATCATCCGAGAAGCCCAAGAAGGTCCCCAGATCGAGGCCTAAGCTCACACCGGAGCTCCTCCTCTCCGATGACGGCCTCGGTTACGTCCTTCGCTACTTCCCTCGCGAGTTCAAGTACCATGGTCGAGGCCACGAGGTTCGTGATTTGGGGAATCTGCTTCAGTTATACTCCGATTGGCACTCTCGCTTGCTTCCTTATTACTCCTTCAGAGAGTTTATTCACAAAGTCGAGAAAGTAGCTGCTACGAGGCGTACATGCCTTAGAGAATTGAGAGAAAGAGTTGCAAGTGGCGGAGATCCAACGAAACTGCGTGAACAGCCAGTTGTGAATGACATTCCTGCTGATGATCGAGAAGATATGGAAGCAAGCCATCAAGAGAGAGATTTGTTTTCAGAACCCCAAAATGTTGAAGACATTCAAGAAGACATGCTTAATGATATATATGATAAAGCTACTGAAGAGGAACCTTCTCAGTCCATGCACAACGTGATTGGTAAAAGTAGCGTAGCTGAAGAGACCACGCCAAATAAGGGAGACAGCAGCAGCATTGGGGGCAAAGCTGAGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTCGAAAGGCGTGCTGCTCGTGCTGCCTCATCACAGCCACAGCCGCAACCACAGGCCTCCTAA 867 0.5075 MQGTATGCYKCGRPGHWSRDCPFSAPNSNPDSAADPTPSRPSSSFKPSSSGGGGTRSAAATASKSSEKPKKVPRSRPKLTPELLLSDDGLGYVLRYFPREFKYHGRGHEVRDLGNLLQLYSDWHSRLLPYYSFREFIHKVEKVAATRRTCLRELRERVASGGDPTKLREQPVVNDIPADDREDMEASHQERDLFSEPQNVEDIQEDMLNDIYDKATEEEPSQSMHNVIGKSSVAEETTPNKGDSSSIGGKAEITEEQRARMEANRLKALERRAARAASSQPQPQPQAS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3543 288 MobiDBLite consensus disorder prediction 22 64 - -
Aev04g3543 288 SUPERFAMILY Retrovirus zinc finger-like domains 6 23 IPR036875 GO:0003676|GO:0008270
Aev04g3543 288 MobiDBLite consensus disorder prediction 216 288 - -
Aev04g3543 288 ProSiteProfiles Zinc finger CCHC-type profile. 8 22 IPR001878 GO:0003676|GO:0008270
Aev04g3543 288 Coils Coil 251 271 - -
Aev04g3543 288 Gene3D - 2 47 - -
Aev04g3543 288 MobiDBLite consensus disorder prediction 221 251 - -
Aev04g3543 288 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Aev04g3543 288 PANTHER TIMELESS-INTERACTING PROTEIN 4 283 - -
Aev04g3543 288 Pfam Replication Fork Protection Component Swi3 78 157 IPR012923 GO:0005634|GO:0006974|GO:0048478
Aev04g3543 288 MobiDBLite consensus disorder prediction 1 81 - -
Aev04g3543 288 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
Aev04g3543 288 PANTHER TIMELESS INTERACTING-RELATED 4 283 IPR040038 GO:0000076
Aev04g3543 288 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3543 Aev-Chr4 33472748 33474534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3543 K10904 - gmx:100799216 365.54