Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3538 ATGTCCATGAGAAGCCTTCTCTCTAGCTCCACGAAGCACTTCGCTTCCAAGCTCTTCCATGGAAGAACAACCTCTCAATTGGCGCAACAATGCAGCACCACCCGAAACTACAGCCTGATCCCTATGGTGATCGAGCACTCTTCCCGAGGCGAGAGAGCCTACGACATCTTCTCGCGCCTCCTCAAGGAACGCATCGTCTGCATCAACGGACCCATCTCAGACGACACCGCACACGTCGTCGTTGCGCAGCTTCTCTTCCTCGAATCTGAAAACCCTTCCAAGCCTATCCATATGTACCTTAATTCCCCTGGTGGTGCCGTCACTGCAGGTCTAGCAATTTATGATACTATGCAGTACATCCGGTCTCCGATTCATACCATCTGTTTGGGTCAAGCTGCATCCATGGGTTCTTTGCTACTGGCTGCGGGTGATAAGGGTCAGAGGCGGTCTCTTCCGAATGCAACCGTCATGATTCATCAGCCCTCTGGTGGTTATAGCGGGCAGGCAAAAGATATTGCTATTCATACCAAGCAGATCGTTCGCATTTGGGATTCATTGAATGCTATTTATGCAAAGCACACGGGTCAATCAGTCGAGGTTATTCAGAAGAATATGGATAGGGATTATTTCATGACTGCAGAGGAGGCAAAGGAGTTTGGGATTATCGATGAGGTTATTGATCAAAGACCAATGGCTTTGGTTTCTGATGCTGTTACTAATGAAGGCAAAGATAAAGGTTCTGATTAG 747 0.4833 MSMRSLLSSSTKHFASKLFHGRTTSQLAQQCSTTRNYSLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPIHTICLGQAASMGSLLLAAGDKGQRRSLPNATVMIHQPSGGYSGQAKDIAIHTKQIVRIWDSLNAIYAKHTGQSVEVIQKNMDRDYFMTAEEAKEFGIIDEVIDQRPMALVSDAVTNEGKDKGSD* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3538 248 SUPERFAMILY ClpP/crotonase 47 230 IPR029045 -
Aev04g3538 248 CDD S14_ClpP_2 55 225 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 29 247 IPR023562 -
Aev04g3538 248 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 29 247 - -
Aev04g3538 248 ProSitePatterns Endopeptidase Clp histidine active site. 148 161 IPR033135 -
Aev04g3538 248 ProSitePatterns Endopeptidase Clp serine active site. 126 137 IPR018215 -
Aev04g3538 248 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 39 229 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 Pfam Clp protease 49 228 IPR023562 -
Aev04g3538 248 PRINTS Clp protease catalytic subunit P signature 95 115 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 PRINTS Clp protease catalytic subunit P signature 126 143 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 PRINTS Clp protease catalytic subunit P signature 204 223 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 PRINTS Clp protease catalytic subunit P signature 55 70 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 PRINTS Clp protease catalytic subunit P signature 147 166 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev04g3538 248 Gene3D - 25 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3538 Aev-Chr4 33446752 33447995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3538 K01358 - jre:108988528 398.282