Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3534 ATGGCGACGCTGCGATTCACTGATTGCTTAGCCTCTCTCTCCGCCGCAAAATCTGCGCATTCCCGCAATCCTCAGAATCGAAGCAGCGCCACCACCAGCTTCGTAGTTCCCAGAGCTTCTCTTCATCACCACCACCACGTCGAGGAGCAATCCTCTCTCTCTAGGAGACGCTTCATCGCCGACACAGCGGCGCTTTCCATCTCGATTCCTCAGTTCGTCGGATTCGAACAAGCAGCGAGGTCCGAAGAGTCGCTCTCTGAGTGGGAGAGAGTTTACCTCCCTATCGACCCTGGCGTTGTTCTTCTTGACATCGCCTTTGTTCCTGATGACCCTAGCCATGGTTTTCTTCTGGGGACAAGGCAAACCATTTTAGAGACGAAAGATGGAGGAAACACTTGGAATCCCCGTTCAATATCCTCCGCGGAGGACGAAGATTTTAACTACAGGTTCAATTCTATCAGCTTCAAAGGGAAGGAAGGGTGGATAGTTGGAAAACCTGCAATTCTGTTATACACTTCTGATGCTGGAGAGAGCTGGGAAAGGATACCACTTAGTGCTGAGCTTCCTGGGGATATGGTATATATAAAGGCAACTGGTGAGAAAAGTGCAGAGATGGTGACTGATGAAGGTGCTATATATGTTACATCGAACAGAGGGTACAATTGGAAGGCTGCTGTTCAGGAAACAGTTTCAGCTACTCTTAATCGAACAGTTTCTAGTGGTATTAGTGGTGCTAGCTATTACACCGGAACTTTCAATACTGTCAATCGCTCTCCAGATGGAAGATATGTTGCAGTCTCTAGTCGTGGTAACTTCTACTTGACATGGGAACCTGGTCAGGCATTCTGGCAGCCACATAACAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGTGGAGGTCTTTATCTCAGCAAGGGCACAGGGCTAACTGAAGAATTTGAAGAGGTTCCTGTTCAAAGCCGAGGTTTTGGCATTCTGGATGTGGGTTACCGATCATCGGATGAGGCTTGGGCAGCAGGTGGAAGTGGTATTCTGTTGAGAACTACCAATGGCGGCAAGTCATGGATCCGCGACAAAGCTGCTGATAACATTGCTGCAAATCTATACTCAGTGAAGTTCATTGATGATAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATGA 1221 0.4832 MATLRFTDCLASLSAAKSAHSRNPQNRSSATTSFVVPRASLHHHHHVEEQSSLSRRRFIADTAALSISIPQFVGFEQAARSEESLSEWERVYLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWNPRSISSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSSDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3534 406 PIRSF Photosystem_II_Ycf48-like 50 406 IPR016705 -
Aev04g3534 406 Pfam Photosynthesis system II assembly factor YCF48 83 404 IPR028203 -
Aev04g3534 406 Gene3D - 149 374 IPR015943 GO:0005515
Aev04g3534 406 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 47 406 - -
Aev04g3534 406 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 87 405 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3534 - - gmx:100810566 677.937