Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3524 ATGAGAAGAGGATTGTTTGGAGCTGTTCTTGTTTCTGATTTTCTTCGTTATAACCGTAACTTCTCACTCTCGAAGCCGCCACCACCACTCTTCACTCTTCTCAAACCCTTCTCCGCCGTCAGATCTGTTTCTTCTTCTTCTTCCGCCGCCGAGATGCCAGGTTCCGACGCGCCGCTGAGTCTGGAGTGGCCGGCGAAGCGCGTGAGGGACACTTTCATTAAGTTCTTTGAGGATAAGAGCCATGTGTACTGGAAGTCTAGTCCCGTTGTTCCATTCAATGATCCAACCCTATTGTTCGCTAACGCTGGCATGAACCAGTTCAAGCCAATATTTTTGGGGACTGCAGATCCTAACACTGCCTTGAGCAAACTCACTCGTGCTTGTAATACCCAGAAGTGCATTCGTGCTGGTGGTAAACACAATGACCTTGATGATGTAGGTAAAGATACCTACCACCACACCTTCTTTGAGATGCTTGGCAATTGGTCCTTTGGGGATTACTTCAAAGAAGAAGCCATTTGCTGGGCATGGGAGCTTTTAACTAAGGTTTATAAATTACCAACAGATCGTATTTATGCCACATATTTTGGTGGTGATGAAAAGGCTGGTCTTGTCCCCGATACTGAAGCTAGAGATATATGGCTAAAGTTTTTGCCTCCTGGGCGTGTGCTTCCTTTTGGCTGCAAAGACAATTTCTGGGAGATGGGTGATACTGGTCCCTGTGGACCTTGCACGGAAATACATTTTGACAGAATTGGTAACCGTGACGCCTCATCATTGGTTAATAATGATGATCCTACATGTATCGAGATATGGAACCTTGTCTTTATTCAGTTCAATAGGGAGGCAGATGGCTCTCTTAAACCTCTACCTGCAAAGCATGTTGATACAGGCTTGGGCTTTGAAAGATTAACGTCTATATTACAGAACAAAATGAGCAATTATGATACTGATGTCTTCTTGCCTATATTTGATGCTATTCAGCTGGCAACTGGTGCTCGGCCATATTCTGGGAAAATTGGGGCAGAAGATGTAGATAAAGTTGACATGGCATACAGGGTTGTTGCAGATCACATCAGAACTCTGTCTATTGCCATTGCTGATGGGTCTCGTCCTGGTAATGAGGGCAGAGAGTATGTTCTTAGGCGTATACTCCGTCGTGCAGTTCGGTATGGACGTGAAGTGCTGAAAGCTAAGGAGGGGTTTTTTAATGGGCTTGTAAGTGTTCTTGTGAAGGTGATGAGTGATGTTTTCCCTGAGCTAAAACAACAGGAAGTGCACATCAGGAACGTAATTGAAGAGGAAGAGGAAAGTTTTGGCAGAACCTTAATTAAGGGAATTGAGAAATTTGAGACAGCTGCTCGACATGTTCAGGGAAAGACTCTGAGTGGGGAGGAAGCATTTGTCTTGTGGGATACATATGGGTTCCCATTAGATCTCACTCAGCTGATGGCCGAAGAAAAAGGTTTACTTGTTGATGTCAATGGTTTTAATAATGCCATGGAAGCTGCAAGAGAGAGATCAAGAAATGCTCAATCAAAGCAAGCTGGTGGTGCCATTGTCATGGATGCTGATGCAACTTCAGCATTGCACAAAAGGGGCGTTGTTCCAACAGATGATAGCTTCAAATATGTTTGGTTCAAGGACCATGAGAGTGTGGTGAAAGCAATATATACTGGTTCTGAGTTTGTTGATTCTGTTAACACTGATGGTGACATTGGCGTGGTTCTAGAATCTACAAGTTTCTATGCTGAACAAGGTGGTCAGATTTTTGATACTGGATCACTTGAGGGTCCACGTGGTTCATTTGAAGTTCGTAATGTCCAAGTTTATGGAGGTTTTGTTCTTCACATTGGTTCTAATGGGAGTGGCATCTCAGTCGGTGACAAAGTAGTATGTAAGGTTGATTATGGAAGGCGTACCCTTATTGCTCCTAACCATACCTGCACACATATTTTAAACTTTGCTCTTAAGGAAGTACTTGGAGATCATGTTGATCAAAAAGGATCTATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCATGGCAAGCCTGTTGATCCTGACAACTTGAGGAGAATCGAGTCAATTGTTAATGAGCAAATTAAAGCTGAATTGGATGTCAATGCAAAGGAGGTTTCTCTTGCTGAAGCTAAGCGTATCAATGGTTTACGAGCTGTTTTTGGAGAAGTCTATCCTGATCCAGTTAGAGTTGTATCAGTTGGACAAAAAGTTGAGGACCTTCTCGCTGACCCTGAGAGTGATAAATGGTTATCTATTTCATCAGAATTATGTGGTGGTACCCATATATCAAACACACGCGAGGCTAAAGCTTTCGCACTTCTGTCTGAGGAAGGAATTGCAAAAGGAATCCGCAGAATAACTGCAGTCACAACTGATCGTGCTTATGATGCAATGAAAGTTGCAGACGAATTCGAGCAGCAAGTAGATGATGCAGCTAATTTAGAGGGAAGTTTGCTGGAAGAGAAAGTCTCATACCTAAAAAGCAATGTGGAAACATTATCACTTCCTGCTGCCAAGAAAGCCGACATAAAGGCCAAGATAGTCCAACTTCAGGATCGGGTGAGGAAAGCACAAAAGCAAGCTGCTGAGGAAAACAAACGTAAAGCCGTGAAGATCACAACAGAGAAGGCTGAACTTGCTGCTTCAGATGGGAAAACATTTTGCATAACTCATGTTGAAGTTGGTCTTGATGTAACTGCGGTTCGCGAAGCAGTTACAAAAGTCATGGAGCAGAAGGGAATATCTGTGATGGTTTTTAGCACTGACCAATCTACAAACAAGGCTGTAGTCTGTGCCGGGGTGCCGGAGAAAGGCGACAAAGGCAAGCTGCTGGATGTGACAGAGTGGCTAACTAATGCTTTAGGGCCTCTAAAAGGAAGATGCGGTAAAGGAAAAGGTGGTCTTGCAACAGGACAGGGAACAGATGCATCACAAGTGAATGAGGCTATGGATCTTGCAGCAACATTTGCATCAATGAAATTGAGTTAA 3015 0.4345 MRRGLFGAVLVSDFLRYNRNFSLSKPPPPLFTLLKPFSAVRSVSSSSSAAEMPGSDAPLSLEWPAKRVRDTFIKFFEDKSHVYWKSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAICWAWELLTKVYKLPTDRIYATYFGGDEKAGLVPDTEARDIWLKFLPPGRVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDASSLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKIGAEDVDKVDMAYRVVADHIRTLSIAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAKEGFFNGLVSVLVKVMSDVFPELKQQEVHIRNVIEEEEESFGRTLIKGIEKFETAARHVQGKTLSGEEAFVLWDTYGFPLDLTQLMAEEKGLLVDVNGFNNAMEAARERSRNAQSKQAGGAIVMDADATSALHKRGVVPTDDSFKYVWFKDHESVVKAIYTGSEFVDSVNTDGDIGVVLESTSFYAEQGGQIFDTGSLEGPRGSFEVRNVQVYGGFVLHIGSNGSGISVGDKVVCKVDYGRRTLIAPNHTCTHILNFALKEVLGDHVDQKGSIVLPEKLRFDFSHGKPVDPDNLRRIESIVNEQIKAELDVNAKEVSLAEAKRINGLRAVFGEVYPDPVRVVSVGQKVEDLLADPESDKWLSISSELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYDAMKVADEFEQQVDDAANLEGSLLEEKVSYLKSNVETLSLPAAKKADIKAKIVQLQDRVRKAQKQAAEENKRKAVKITTEKAELAASDGKTFCITHVEVGLDVTAVREAVTKVMEQKGISVMVFSTDQSTNKAVVCAGVPEKGDKGKLLDVTEWLTNALGPLKGRCGKGKGGLATGQGTDASQVNEAMDLAATFASMKLS* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3524 1004 Coils Coil 849 876 - -
Aev04g3524 1004 PANTHER BNACNNG61840D PROTEIN 27 1003 - -
Aev04g3524 1004 Gene3D - 891 999 - -
Aev04g3524 1004 PANTHER ALANYL-TRNA SYNTHETASE 27 1003 - -
Aev04g3524 1004 TIGRFAM alaS: alanine--tRNA ligase 68 980 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 PRINTS Alanyl-tRNA synthetase signature 296 309 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 PRINTS Alanyl-tRNA synthetase signature 269 280 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 PRINTS Alanyl-tRNA synthetase signature 353 369 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 PRINTS Alanyl-tRNA synthetase signature 141 152 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 PRINTS Alanyl-tRNA synthetase signature 377 390 IPR002318 GO:0000166|GO:0005737
Aev04g3524 1004 SUPERFAMILY Class II aaRS and biotin synthetases 65 315 IPR045864 -
Aev04g3524 1004 SUPERFAMILY Translation proteins 562 635 IPR009000 -
Aev04g3524 1004 SUPERFAMILY ThrRS/AlaRS common domain 635 811 IPR018163 GO:0000166
Aev04g3524 1004 Pfam tRNA synthetases class II (A) 68 637 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Aev04g3524 1004 Gene3D Bira Bifunctional Protein; Domain 2 64 312 IPR045864 -
Aev04g3524 1004 Hamap Alanine--tRNA ligase [alaS]. 63 1003 IPR023033 GO:0004813
Aev04g3524 1004 Coils Coil 494 514 - -
Aev04g3524 1004 Pfam DHHA1 domain 858 996 IPR003156 GO:0003676
Aev04g3524 1004 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 737 795 IPR012947 GO:0004812|GO:0005524|GO:0043039
Aev04g3524 1004 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 63 809 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Aev04g3524 1004 CDD AlaRS_core 65 311 - -
Aev04g3524 1004 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 316 516 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Aev04g3524 1004 SMART tRNA_SAD_4 737 796 IPR012947 GO:0004812|GO:0005524|GO:0043039
Aev04g3524 1004 Gene3D - 636 812 - -
Aev04g3524 1004 Gene3D - 543 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3524 Aev-Chr4 33325702 33332616 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3524 K01872 - gmx:100788271 1687.16