Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3511 ATGAAAAAAGGTTTCTGTGGTGGTTTATCGTTGGTTTCGTTTCATGAAATTGAAACCCCAATGGCAAGCCATCATGGGAAGATTGCTCCGTTGAATGGGTCTGTCTATGTCTGCAACTTGCCCTATGGGACCGACGAGAATATGTTGGCCGAGTATTTTGGCACTATTGGCTTAATCAAGAAAGATAAGCGGACAGGGAGACCAAAGATATGGTTGTATCGAGATAAGGAGACTAACGAACCAAAGGGAGATGCTACTGTAACGTATGAGGATCCTCATGCTGCTGCAGCTGCTGTTGAATGGTTTAACAACACAGATTTTCATGGTAGTACGATTGGAGTTTTTATCGCGGAGTCAAAAAACAAGGATGAACAACCATATAATTCAGTGGCAGAACCTGATGTTGCTGGTAATGTTGGTGAACTAGAGGAAGCTGCTAGGGATGTTAATGGGGGTAGTGGAAGAGGTAGAGGCCAAAATGATTCTTCAGGCAAACCGTGGCAACAAGAGGGCGATTGGTTGTGTCCGAATACCAGTTGCGGCAATGTGAATTTTGCTTTTCGTGGTGCGTGTAATCGCTGTGGAAGTGCTCGTCCAGCTGGTGTTGGTGGTGCTGCAGGTGCTGGTGGCCGTGGCAAGGGACGTGCTGGTCCTGCTGGACAAGATCCAGGGGGTATTGGCCGTCCAGCTGGTGGAGGGCTCTTTGGACCTAATGATTGGCCTTGTCCAATGTGTGGTAATATCAATTGGGCGAAGCGGACTAAGTGTAATATTTGCAATACAAATAAGCCTGGTCACAACGAGGGTGGTGTAAGAGGAGGGCGAGGTGGCGGCTACAAAGAGCTTGATGAAGAGGAAATAGAGGAAACTAGACGTCGTAGGAGGGAGGCTGAAGATGATGGGGAGTTATACGATGAGTTTGGAAATCTTAAGAAGAAATTCCGTGCCAAAACACAGCAAGCTGAAGCTGCGCGAGTGCTTCCTGGTTCAGGGCGTGCTGGCTGGGAAGTCGAGGATCTAGGGATTGATAGCGACACTAGAGAAAGAAGTAGAGACAGAGGAAGAGATCGTAACGATGGGGAGAGCAGGAGCAGGGAGCGAAGTGAGAAAGAGAGGCCGAGCAGCCGGAACAGAGAGAGGGACAGGGGAAGAGACCGTGACTGGGATTATGACGATCGAGATAGAGATTATGGGCGAGATAGGGATCGGGACCGGGACCGAGACCGAGACCGGAGTAGGCATCGTTATTGA 1251 0.4924 MKKGFCGGLSLVSFHEIETPMASHHGKIAPLNGSVYVCNLPYGTDENMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNEPKGDATVTYEDPHAAAAAVEWFNNTDFHGSTIGVFIAESKNKDEQPYNSVAEPDVAGNVGELEEAARDVNGGSGRGRGQNDSSGKPWQQEGDWLCPNTSCGNVNFAFRGACNRCGSARPAGVGGAAGAGGRGKGRAGPAGQDPGGIGRPAGGGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEEIEETRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARVLPGSGRAGWEVEDLGIDSDTRERSRDRGRDRNDGESRSRERSEKERPSSRNRERDRGRDRDWDYDDRDRDYGRDRDRDRDRDRDRSRHRY* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3511 416 MobiDBLite consensus disorder prediction 338 416 - -
Aev04g3511 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 119 IPR000504 GO:0003723
Aev04g3511 416 CDD RRM_SARFH 35 117 - -
Aev04g3511 416 SMART rrm1_1 34 115 IPR000504 GO:0003723
Aev04g3511 416 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 21 409 - -
Aev04g3511 416 MobiDBLite consensus disorder prediction 277 300 - -
Aev04g3511 416 SUPERFAMILY Ran binding protein zinc finger-like 162 201 IPR036443 -
Aev04g3511 416 MobiDBLite consensus disorder prediction 265 300 - -
Aev04g3511 416 MobiDBLite consensus disorder prediction 202 232 - -
Aev04g3511 416 MobiDBLite consensus disorder prediction 333 416 - -
Aev04g3511 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 112 IPR000504 GO:0003723
Aev04g3511 416 ProSiteProfiles Zinc finger RanBP2 type profile. 169 200 IPR001876 -
Aev04g3511 416 MobiDBLite consensus disorder prediction 146 170 - -
Aev04g3511 416 ProSitePatterns Zinc finger RanBP2-type signature. 240 259 IPR001876 -
Aev04g3511 416 ProSitePatterns Zinc finger RanBP2-type signature. 173 194 IPR001876 -
Aev04g3511 416 SUPERFAMILY RNA-binding domain, RBD 34 122 IPR035979 GO:0003676
Aev04g3511 416 SUPERFAMILY Ran binding protein zinc finger-like 230 266 IPR036443 -
Aev04g3511 416 Pfam Zn-finger in Ran binding protein and others 239 265 IPR001876 -
Aev04g3511 416 Pfam Zn-finger in Ran binding protein and others 170 199 IPR001876 -
Aev04g3511 416 Gene3D - 166 201 - -
Aev04g3511 416 Gene3D - 235 266 - -
Aev04g3511 416 Gene3D - 32 115 IPR012677 -
Aev04g3511 416 Coils Coil 280 300 - -
Aev04g3511 416 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15 21 409 - -
Aev04g3511 416 ProSiteProfiles Zinc finger RanBP2 type profile. 236 265 IPR001876 -
Aev04g3511 416 MobiDBLite consensus disorder prediction 155 170 - -
Aev04g3511 416 SMART zf_4 171 197 IPR001876 -
Aev04g3511 416 SMART zf_4 238 262 IPR001876 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3511 - - aip:107628735 532.332