Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3507 ATGCCTAAGCTTTGTGACTTGCAAATCAACATTGATGGAGAACAGATATTCCTATTGAAAGAGAAGGTTATATCAAAATACTGTGGAAAGTTGAAGAGGATCATGAATCATCAAAAGAGATGTCATGTGAAGAACTTGGGGGTTAGAATCAATGATTTCCCAGGTGGGTCGGATGGGTTTGAACTGGTTTCAAGGTTCTGTTACAACAATGGTAACATCCCAATCACTGCCTCTAATGTGCCAATCCTCTATTGCTCTGCTTTTTATCTTGGAATGACAGAGGAGGTTTTCAGCAACAATCTCTTGCAACAAACAGAAACATTTCTTGAAAGAATCTGTTACTGGAAATGGAATGATATACTTGTGAGTCTCATGAGTTGTGAGGTGGTTTTTCCATATGCAGATTGGAATGGTCTATTAGAGAGGATCATTTGTGCAGTGTTGGCAAAGATTAAACAGAATCCAGATGTGAACCTCATCAATTCATGCTCTTCATCATCATCATATTCCTCTCCAGAAAGCAATTCTGGTAAGAGATTCTCTTCTTCAACAAGGGCAACCCCTGAAAAAATCAAGTCAACTCTGCCAAGCAAAGCATGGTGGTTTGATGATTTGGCAACCTTACCCCCAAAGATCATTGAGAAGCTCTTTCAGGTCATTGGTGCTTACAGAGCTGATAACAACAACTTGATCCTCACAAGGTTTCTGTTGCATTATCTGAAAAGAGCTACTCAGACAAGAGTTGCTGATTGCAGAAACAGCAGTGATGAGTATGCTGCTCTTGCAGAAACAGCTGTTTATGGGGTCATATTTGTTGGCAAGGAGAGTTTTTCCTGCAGGGCCCTATTTTGGGTTCTGAGGATTGTATCTGGGTTTGGATTGAGTAAAGGTTGCAGGATTGAACTTGAGAAGTTGATTGGTGGGGTGTTAGAACAAGCCACTCTGGATGATCTTCTTGTCTCTGGACATGATATGGGGGTTCATTATGATGTTAATTTGGTGATAAGATTGGTTAGACTATTTGTTGATATAAATGGTTCTGATGATGGGGTGTCATTACAAAAATTGAAAAGGGTTGGAAGATTGATGGACAAGTATTTGAGGGAGATATCACCTGATCAGAATCTCAAGATCTCAAAGTTTCTTGGAGTAGCAGAATGCTTGCCAGATTCTGCAAGGGATAGCTTTGATGGGGTTTATAGAGCCATTGACATCTATCTTGAGTCTCATCCAATGATCACATTTGAGGAAAGATCAAGATTGTGTAGATGTCTTAACTACAGTAAACTCAGCTTTGAAGCAAGTAAAGACCTAGCCAAGAACCATAGAATACCACCAAGGGTTGCAATGCAGGCTCTTATTTCTCAACAATCAAAAATTGCTACAACAAACGACTTCGAGGTTGAGACTCCAAGGATGAACCCTTACCAATTGGTTTTGTACAATGATCCAAACAGGAACAGCTTCTCCCAAGAGAAAAAGGATGTGACTCTAAACATGGAGAAAATTCAATGGAGAGTGGTGGAACTAGAGGAACTATGCAAAGAAATGAAAGACCATCAGATGTCAAAATTTGTCAACCGAAATGTGTTGCTTAATCCTATTCGCTCAAGAGCCTCCCCAAGATTTTGCTGA 1635 0.4 MPKLCDLQINIDGEQIFLLKEKVISKYCGKLKRIMNHQKRCHVKNLGVRINDFPGGSDGFELVSRFCYNNGNIPITASNVPILYCSAFYLGMTEEVFSNNLLQQTETFLERICYWKWNDILVSLMSCEVVFPYADWNGLLERIICAVLAKIKQNPDVNLINSCSSSSSYSSPESNSGKRFSSSTRATPEKIKSTLPSKAWWFDDLATLPPKIIEKLFQVIGAYRADNNNLILTRFLLHYLKRATQTRVADCRNSSDEYAALAETAVYGVIFVGKESFSCRALFWVLRIVSGFGLSKGCRIELEKLIGGVLEQATLDDLLVSGHDMGVHYDVNLVIRLVRLFVDINGSDDGVSLQKLKRVGRLMDKYLREISPDQNLKISKFLGVAECLPDSARDSFDGVYRAIDIYLESHPMITFEERSRLCRCLNYSKLSFEASKDLAKNHRIPPRVAMQALISQQSKIATTNDFEVETPRMNPYQLVLYNDPNRNSFSQEKKDVTLNMEKIQWRVVELEELCKEMKDHQMSKFVNRNVLLNPIRSRASPRFC* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3507 544 Pfam NPH3 family 200 435 IPR027356 -
Aev04g3507 544 PANTHER OS12G0117600 PROTEIN 2 517 IPR043454 -
Aev04g3507 544 SUPERFAMILY POZ domain 3 94 IPR011333 -
Aev04g3507 544 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 517 - -
Aev04g3507 544 Coils Coil 500 520 - -
Aev04g3507 544 ProSiteProfiles NPH3 domain profile. 199 459 IPR027356 -
Aev04g3507 544 MobiDBLite consensus disorder prediction 166 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3507 Aev-Chr4 33221447 33224391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3507 6 526 EF-hand Containing Proteins AT3G44820 28.448 2.93e-57 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3507 - - adu:107477162 864.374