Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3494 ATGCTTGTGATCATGATGATGATGATGCTTGCAACAATTGAAGGTGCAAGCTTGATACACAAAGCAGGGAATTGGGGTTCAAGTATCAAAACAGAGAAGGACACAGTGACGAATCTTCAATTCTATTTCCACGACACACCAAGTGGACAAAGCCCTAGTGCTATTCAAGTTGCTCAGCCACTTGACAAGAGCAAATCATCCCTCACCATGTTCGGTACCATCATGATGGCCGACGATCCCTTGACCGAGACGTCCGACCCAAAGTCTAAGCTTGTGGGTCGGGCTCAAGGGCTGTACGGGTCGTCGTGCCAGCGAGAAGTGGGCCTTATTATGGCCCTTAGCTACTCGTTTACGGATGGACCTTATAATGGGAGCTCGTTCGCACTTTTGGGGAAGAATTCAGCTATGAACCCGGTTCGTGAGATGCCCGTTGTGGGTGGCACGGGACTTTTTCGTATGGCACGTGGCTATGCTGTTGCTAAGACTTATTGGCTTAATCCTGCTACTGGTGATGCCATTGTTGGCTATAATGTTCACCCACCAAACATTATTAGCCGCGGCCGCCACCACCGTCATTTTCCCCAGATCCGCCGTCCATGGTGGCCGGAGCTGCCACAACAACCCCAGCACCACATACACATAGATGACGAGTCGCAACTGCAACTCACATGGTCTTGTCCCTCTGCAATGCCAACACCTCTCTCGTTCCCAAGCATCTTCAAGCTCAACAAACGCTTCAAATCCCACAAGCTCTGCATCGTCAAGTCCCTCCTCCTCAACGCTCCTTCCCTCAACGACGCCGTTTCATCTCTTGACCTTTTCCACCCTCGCGGCATTCGTTTACCCTCTTGCGTCCTCGCCACCCTCCTCCGCCATTGCTCCGAAGCTAGATCCTACCGTGAGGGGAAATTGGTCCATCTACATCTCAAGCTCACTGGTTTCAAACGCCCCACAACTTTCCTCGCCAACCATTTGATCTCGATGTACTTCAGTTGCGGCGATTTCGTTAGCGCTCGCAAGGTGTTCGACAAAATGGAGGTGAGGAATTTGTACTCTTGGAACAATATGCTTTCTGGGTATGTTAAATTGGGCATGATGAAGCAGGCGAGGAACCTGTTTGATAGAATGCCTGAGAGGGATTTCGTGTCTTGGAATACTATGGTTGTTGGGTATGCGCGTGATGGGGTGTTTGGTGAGGCTCTGAGGTTTTATGTAGAGTTGAGAAGGTTGTGTATTGGGAATAATGGGTTTAGTTTTGCGAGTGTGTTGATTGTTTGTGTGAAGTTGAAGGATTTTGAGCTTTCTAGGCAGGTTCATGGACAGGTTTTGGTTGTTGGATTTTTGTCCAATGTGGTTGTATCGAGCTCTATCGTTGATGCTTATGCGAAGTGTGGGAAGATGGAGGATGCGAGGAGGTTGTTTAATGAGATGCCTGTGAGGGATATCCCTGCTTGGACGACATTGGTTTCGGGTTATGCTGCATTGGGGGACATGGAATCAGCTGCTGACGTTTTCAATCAGATGCCGAGGAAAAATTCTTATTCATGGACAAGTTTGATTAGTGGTTATGCTAGAAATGGTATGGGTTATGAGGCACTTGGAGTGTTTATGAAGATGATCGAGCATCGAGATAGACCTGATCAGTTTACATTCAGTAGTTGCCTCTATGCTTGTGCCTTTATTGCTTCGTTGAAACATGGTAAACAGATACATGCATTTTTGTTGCGAAATAACATTAGACCTAATACCATTGTTGTTAGTGCTATTGTTGACATGTATTCAAAATGTGGATGCATGGAAACTGCCAAGCGAGTATTCAACTTAATTAGAAATAAACAAGATGTAGTGTTGTGGAACGCGATGATATCTGCACTGGGTCACCATGGATGTGGTATAGAAGCAATTATGATGCTAAATGATATGCTAAGATCAGGAGTGAAGCCAAATAGGTCCACCTTTGTTGCCATTCTAAATGCTTGCAGTCGTTCAGGTCTTGTGCAGGAAGGGCTTCGGTTTTTCATGTCGATGAATAGTGAGCATGGTGTTCTTCCAGACCAAGAACACTATGCATGCCTGCTTGATCTTTTAGGTAGAGCTGGTGAATGCTTAGATGAATCAGGGAATGATCTGCAGATGATAGATTGTAGGCCTGTTGAGCATGTCAGGAATTCTTTGCTTGGCGTATGTAGAACACATGAAAATTTAGCTCTTGAAAGAGAAGTACATGAACTCCCTATGAAATTGCAGCCTCAAACTTCTGCTGCTTATCTATTACTTCCAAGTATTTATGCTGCCCTTGTGAAAAGAGGATTGGTTGAGAAAATGAAACAGATTATGAATGAGCAATGTAGTTATGCTACAACATACATTGGTATAGTTAGAAGATGTTACCTCCAAGATAACCGAGGAGGAATGAGAGAAGAGATCATTATCAAGATGGGTGCTGAGGTCTCCAAACAGGTCGAGAGGCGAAAAGAGATCCAAACAGAAGAGAAAATTCTCAATGATCTGTTGACAAGTGCTGGTGATGAATACCCTGGCTCTAATTACCATCCTTCAGACAGAAAGAACTGGATGCAGAGTCTCAACCCTGAGAAGCTTCAAATCAAGAACATTGTTTGGCCTGGAACACATGATTCTGCTACAAACAAGATTGGCATACCAGGCATCACACGCCCTTTCGCTCAATGCCAAACACTGTCTATTTACCAGCAGCTTGTAAACGGCACGCGTGTGTTCGACATAAGGGTGCAGAAGGATCGAAAGGTTTGCCATGGAATCCTCAGTACTTACAGCATAGATGTTGTGATCAATGATGTGAAGAAGTTCATGTCAGAGACAGAATCTGAGATCATAATCCTTGAGGTTAGAACCGAGTATGGTCAAATGGATCCACCCCAATTTGACAAGTACCTAGAGCAACACCTTGGTGAATACCTTGTACCACAAGATGAACAAGTTTTTGACAAGACTATAGCAGAGTTGTTGCCAAAAAGGGTTATATGTGTTTGGAAGCCAAGAAAATCAGCAAAGCCAGAGAAAGGTAGCAAATTGTGGAGTGAAGGGTATTTGAGGGACAATTGGATTAACACTGATTTGCCATCAACAAAGTTTGATAGCAACATGAAGTTTCTGAGTGAACAGAAACCTGTTAATGAGAGGAAGTACTTTTATAGGGTTGAGAATACTGTTACACCTGTGCCTGATAACCCTGTTTTGTGTGTGAGACCTGTTACAGAAAGGATTCATGGTTTTGCTAGGCTCTTCATGTCTCAGTGCTTCATCAAAGGCTTTGCTGATAGGTTGCAGGTTTTCTCTACTGATTTTATAGATGATGATTTTGTTGATGCTTGTGTTGGACTCACTCATGCAAGGATTCAGGGTGGAGCCCGATCATGA 3399 0.446 MLVIMMMMMLATIEGASLIHKAGNWGSSIKTEKDTVTNLQFYFHDTPSGQSPSAIQVAQPLDKSKSSLTMFGTIMMADDPLTETSDPKSKLVGRAQGLYGSSCQREVGLIMALSYSFTDGPYNGSSFALLGKNSAMNPVREMPVVGGTGLFRMARGYAVAKTYWLNPATGDAIVGYNVHPPNIISRGRHHRHFPQIRRPWWPELPQQPQHHIHIDDESQLQLTWSCPSAMPTPLSFPSIFKLNKRFKSHKLCIVKSLLLNAPSLNDAVSSLDLFHPRGIRLPSCVLATLLRHCSEARSYREGKLVHLHLKLTGFKRPTTFLANHLISMYFSCGDFVSARKVFDKMEVRNLYSWNNMLSGYVKLGMMKQARNLFDRMPERDFVSWNTMVVGYARDGVFGEALRFYVELRRLCIGNNGFSFASVLIVCVKLKDFELSRQVHGQVLVVGFLSNVVVSSSIVDAYAKCGKMEDARRLFNEMPVRDIPAWTTLVSGYAALGDMESAADVFNQMPRKNSYSWTSLISGYARNGMGYEALGVFMKMIEHRDRPDQFTFSSCLYACAFIASLKHGKQIHAFLLRNNIRPNTIVVSAIVDMYSKCGCMETAKRVFNLIRNKQDVVLWNAMISALGHHGCGIEAIMMLNDMLRSGVKPNRSTFVAILNACSRSGLVQEGLRFFMSMNSEHGVLPDQEHYACLLDLLGRAGECLDESGNDLQMIDCRPVEHVRNSLLGVCRTHENLALEREVHELPMKLQPQTSAAYLLLPSIYAALVKRGLVEKMKQIMNEQCSYATTYIGIVRRCYLQDNRGGMREEIIIKMGAEVSKQVERRKEIQTEEKILNDLLTSAGDEYPGSNYHPSDRKNWMQSLNPEKLQIKNIVWPGTHDSATNKIGIPGITRPFAQCQTLSIYQQLVNGTRVFDIRVQKDRKVCHGILSTYSIDVVINDVKKFMSETESEIIILEVRTEYGQMDPPQFDKYLEQHLGEYLVPQDEQVFDKTIAELLPKRVICVWKPRKSAKPEKGSKLWSEGYLRDNWINTDLPSTKFDSNMKFLSEQKPVNERKYFYRVENTVTPVPDNPVLCVRPVTERIHGFARLFMSQCFIKGFADRLQVFSTDFIDDDFVDACVGLTHARIQGGARS* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3494 1132 Gene3D - 25 169 IPR044859 -
Aev04g3494 1132 Gene3D Tetratricopeptide repeat domain 257 412 IPR011990 GO:0005515
Aev04g3494 1132 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 819 1127 - -
Aev04g3494 1132 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
Aev04g3494 1132 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 875 997 - -
Aev04g3494 1132 Gene3D Tetratricopeptide repeat domain 414 565 IPR011990 GO:0005515
Aev04g3494 1132 SUPERFAMILY PLC-like phosphodiesterases 854 1121 IPR017946 GO:0006629|GO:0008081
Aev04g3494 1132 Gene3D Tetratricopeptide repeat domain 566 840 IPR011990 GO:0005515
Aev04g3494 1132 PANTHER UNCHARACTERIZED 819 1127 - -
Aev04g3494 1132 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 614 648 IPR002885 -
Aev04g3494 1132 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 649 684 IPR002885 -
Aev04g3494 1132 Pfam Phosphatidylinositol-specific phospholipase C, X domain 894 987 IPR000909 -
Aev04g3494 1132 SMART plcx_3 868 1004 IPR000909 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 652 685 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 456 482 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 382 409 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 514 542 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 616 649 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 484 511 IPR002885 -
Aev04g3494 1132 TIGRFAM PPR: pentatricopeptide repeat domain 351 382 IPR002885 -
Aev04g3494 1132 CDD PI-PLCXDc_plant 845 1125 - -
Aev04g3494 1132 Pfam PPR repeat 587 611 IPR002885 -
Aev04g3494 1132 Pfam PPR repeat 382 410 IPR002885 -
Aev04g3494 1132 Pfam PPR repeat 455 481 IPR002885 -
Aev04g3494 1132 Pfam PPR repeat 323 349 IPR002885 -
Aev04g3494 1132 Pfam PPR repeat 351 380 IPR002885 -
Aev04g3494 1132 Gene3D Phosphatidylinositol (PI) phosphodiesterase 854 1122 IPR017946 GO:0006629|GO:0008081
Aev04g3494 1132 Pfam Dirigent-like protein 37 179 IPR004265 -
Aev04g3494 1132 Pfam PPR repeat family 614 661 IPR002885 -
Aev04g3494 1132 Pfam PPR repeat family 511 558 IPR002885 -
Aev04g3494 1132 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 512 546 IPR002885 -
Aev04g3494 1132 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 450 484 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3494 Aev-Chr4 33149389 33154609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3494 813 1130 Acyl Lipid Metabolism Gene Families AT4G38690 68.553 2.34e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3494 - - lja:Lj3g3v3500060.1 759.599