Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3486 ATGGATCTCTTCTCATCCACTCTCATTTTCCTCCTACTCCTCACACTCCCACTCCAAGGTGCTTTTGGTGCTACCTTCACATTCGTCAACAAATGCGACTACACAGTGTGGCCAGGAATCCTCGCAAATGCAGGTAGCCCTCCTCTCGACAGCACCGGTTTCGAGCTCCCAAAGGAAACTTCCAGAACCTTCCAAGCCCCTACGGGCTGGTCAGGCCGATTCTGGGGCAGAACCAGCTGCAACTTCGACGCCTCCGGATCCGGATCCGGGTCATGCCTCACCGGAGACTGTGGCTCCGGCCAGATCGAGTGCAACGGCGCAGGCGCCGCCCCTCCCGCCACCCTCGCCGAGTTCACGCTCGGCAACGGCGGCCAGGACTTCTACGACGTCAGCCTCGTCGACGGGTACAACCTGCCGATGATCGTGGAAGGAACTGGCGGGTCGGGTCAGTGCGCATCGACGGGTTGCACTTCGGATCTGAACCAGCAGTGCCCATCGGAGCTGAAGGCAGTGGATGGGAGCGCGTGTAAGAGCGCGTGTGAGGCGTTTGGGAGCCCAGAGTACTGTTGCAGCGGCGCGTATGGGTCACCGTCTACTTGCAGGCCTTCTATTTACTCTGAGATGTTTAAGGCTGCTTGCCCTCGATCGTATAGCTACGCATACGATGATGCTACGAGTACATTTACGTGTACGGGTGCTGATTATACGGTTACCTTTTGCCCATCCTCTCCAAGTCAGAAATCTTCAAGAGATACAAGTCCAATGACATCAAATACTACACCCATAGGGATAGGGACAGGAACAACAACAACAGGAGGAGGATCCGAAGGTTCAGGGGTTGTATACACGGGTGCTGACCCGGGTTTCGGGTATTCATCATCAACGGGTTCAGGATCCGGAGAGGCCATGCTTGCAGACGGGTCATACCTAGCTGGTTTGGCTATGGGAGACTCACCTAGGACTAGGACTAGCACATTTTCCTCTGCATTTCTCTATTCTGTTACTACCTTTTTGCTTGTTTTCTTCTTGCTTTAA 1035 0.5469 MDLFSSTLIFLLLLTLPLQGAFGATFTFVNKCDYTVWPGILANAGSPPLDSTGFELPKETSRTFQAPTGWSGRFWGRTSCNFDASGSGSGSCLTGDCGSGQIECNGAGAAPPATLAEFTLGNGGQDFYDVSLVDGYNLPMIVEGTGGSGQCASTGCTSDLNQQCPSELKAVDGSACKSACEAFGSPEYCCSGAYGSPSTCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSRDTSPMTSNTTPIGIGTGTTTTGGGSEGSGVVYTGADPGFGYSSSTGSGSGEAMLADGSYLAGLAMGDSPRTRTSTFSSAFLYSVTTFLLVFFLL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3486 344 Gene3D Thaumatin 24 241 IPR037176 -
Aev04g3486 344 ProSiteProfiles Thaumatin family profile. 23 241 IPR001938 -
Aev04g3486 344 PANTHER OS03G0233200 PROTEIN 6 265 IPR001938 -
Aev04g3486 344 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 265 - -
Aev04g3486 344 MobiDBLite consensus disorder prediction 242 277 - -
Aev04g3486 344 Pfam Thaumatin family 30 241 IPR001938 -
Aev04g3486 344 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Aev04g3486 344 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Aev04g3486 344 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Aev04g3486 344 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Aev04g3486 344 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Aev04g3486 344 CDD TLP-PA 25 240 - -
Aev04g3486 344 SMART tha2 26 241 IPR001938 -
Aev04g3486 344 SUPERFAMILY Osmotin, thaumatin-like protein 24 242 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3486 Aev-Chr4 33087123 33088882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3486 4 271 Receptor kinase-like Gene Family AT5G38280 46.127 1.28e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3486 - - ahf:112789067 540.806