Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3474 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCTTCCTCTGGTCCCACCACTCGTTCCAGCAACAAGCGCGCACGCCTCAACAACAACAACAACACCAACACCTCTTCCTCTTCTGCTTCTGCAACCGCCTCCACAACCGCCGCAATCATCACGACCCGTTCACGTGCGTCTCGTTCCAACAAGGATCCTCCTCCGCCTAAGAATTCTCCCCTTCCTCCACCTGCGCCTCCGATGGACTCCAACGAATCCTCTGGCTCACGACGCAACCGTGGGAAGAATTCCGACAGGGACAATTCTGACAAGGGGAAAGAGAAGGAGCACGATGTTAGGGTTAGGGATAGGGATGCTGAGAGGGGATTGGCTTTGAATATGGAGAGTGGCGGTGTTGGCGATGACGATGATAACGATAGCGAGGGCGGTGTGGGGATTCTGCACCAGAACCTGACGTCAGCTAGCAGTGCCCTTCAGGGGCTGCTCCGGAAACTCGGTGCCGGCCTCGACGATCTGCTTCCGTCGTCAGCGATGGGTTCATCCTCGGCGTCTCACCAGAGCGGGAGGTTGAAGAAGATTCTCTTTGGGTTGAGGGCTGATGGGGAAGAAGGTAGACAGGTTGAGGCATTGACGCAGCTTTGTGAGATGCTATCAATTGGGACTGAGGAATCTCTCAGCACGTTCTCTGTTGATTCGTTCGTTCCCGTGCTGGTGGGGTTGCTTAATCATGAGAGTAATCCTGATATCATGCTTCTTGCTGCGAGGGCTCTTACCCATCTCTGCGATGTGTTGCCTTCTTCTTGTGCTGCTGTTGTGCACTATGGTGCAGTATCGATCTTCTGCGCGAGGTTGCTTACCATAGAGTATATGGACTTAGCTGAGCAGTCTCTTCAAGCACTGAAGAAGATATCGCAGGAGCACCCAACTGCTTGCCTTAGAGCTGGTGCCCTTATGGCTGTGCTTTCTTATTTGGATTTCTTCTCCACAGGTGTTCAGCGTGTGGCATTGTCTACTGCTGCAAATATGTGCAAGAAGCTTCCTTCAGATGCGGCTGATTTTGTTATGGAAGCCGTCCCTCTTTTAACCAACCTCCTTCAGTACCATGATGCGAAGGTTCTGGAGCATGCCTCTGTATGTCTAACTCGAATAGCTGAAGCTTTTGCATCATCTCCGGACAAATTAGATGAATTGTGCAATCATGGACTAGTAACTCAGGCTGCTTCCCTCATTTCAACCAGCAGTTCTGGAGGTGGACAGGCTTCTCTCAGCACATCAACATATACTGGTTTAATCCGACTTCTTTCAACTTGTGCAAGTGGGTCTCCTCTTGGAGCTAAAACTTTGCTTCTCCTTGGAATTAGTGGCATTCTTAAAGATATTCTATCTGGCTCGGGAGTTTCCTCTAATGTTTCTGTTTCCCCTGCATTAAGTAGGCCACCAGATCAGATATTTGAGATTGTGAACCTTGCAAATGAGCTCCTACCCCCATTGCCACAGGGGACAATATCCCTCCCAGTCAGTAGCAACTTGTTTGTGAAAGGGCCTGTCATAAGAAAGTCTGCTGCTGGCAGTTCTGGGAAGCAAGAAGATACAAATGGAAATGTTACTGAGATATCTTCTCGTGAGAAACTATTGAATGATCAGCCTGAACTACTTCAGCAATTTGCGATGGATCTCCTTCCAGTTTTAGTACAGATTTATGGTTCTAGTGTCAATGGTCCTGTCCGGCATAAATGTCTTTCTGTCATCGGAAAGCTAATGTATTTCAGCACAGCAGAGATGATTCAGTCTTTGCTGAGTGTGACAAATATATCTAGTTTCTTAGCTGGTGTCTTAGCCTGGAAAGATCCACATGTTTTGGTCCCTGCCTTGCAAATTGCCGAAGTTCTTATGGAAAAACTTCCTGGGACATTTTCTAAGATGTTTATCAGAGAAGGTGTTGTCCATGCTGTAGACCAGCTTATTTTGCCTGGAATTTCCACCAATGTCCCCACTCAAGCGGCATCTGCTGAGAAGGATAACGATTCCATATCTGGAACATCATCTCGGTCAAGGCGTTATCGTCGACGCAGTGGTAACAACAATCCTGAGGGGAATCCTTTGGATGATTTGAAGAGTCCAGCCTCTGTAAATGTTGGTTCACCTCCAAGCTCTCTTGATGTTCCAGCAGTAAATTCTAGTATACGCTCATCTGTTAGCACTGCTGCTAAAGCTTTTAAAGATAAGTACTTCCCTTCTGATCCTGGGGCTGTTGAAGTGGGTGTTACTGATGATCTATTGCGTCTGAAAAATCTTTGCGTCAAATTAAATGTTGGAGTTGATGACCAAAGGTCTAATGGAAAGGGGAAATCTAAAACTTCAGGATTTGTTGTGGAAGAGATTTCTGCTACTAAGGAAGAGTACTTGATTGGGTTAATATCTGACATGCTTATGGAACTTGGCAAAGGAGATGGAGTATCTACTTTTGAGTTTATTGGTAGTGGTGTCGTTGCTGCTTTGCTCAATTACTTTTCTTGTGGATATTTCTCCAAAGATCGAACCCCTGAGACCAATTTGCCCAAGCTTCGTCAGCAGGCACTCATGAGGTTTAAGTTGTTTATAGCTGTTGCACTACCTTCCAGTACTGATGATGTTGGGGTTTTGGCTCCAATGACTGTCTTGGTCCAGAAGCTTCAAAATGCTTTGTCCTCCCTGGAGCGTTTCCCTGTTGTGCTGAGTCATTCAGCTAGGACAACTAGTGGAAGTGCACGCCTCTCCTCTGGATTAAGTGCATTATCTCAGCCCTTCAAGTTGCGTCTCTGTCGAGCCCAGGGTGAGAAGTCACTTAGGGATTATTCATCCAATGTTGTGCTGATTGATCCTTTAGCAAGTTTAGCAGCCATAGAGGAATTTCTTTGGCCCCGCATCCAGCGAAGTGAATCTGGTCAGAAGTCAACTGTACCTGCTGGGAATTCTGAATCTGGAACAACTCCTACAGCAGCTGGTGTTTCATCTCCTTCTACTTCTACTCCTTCTACCACTCGTCGTCATTCTACAAGATCCAGATCATCAGTTAATATCGGTGATACACCGCGAAAGGAGATGACTCAAGATAAAGGCACAAGCTCATCTAAGGCTAAGGGAAAAGCAGTGTTGAAGCCCGCACAAGAGGAGTCAAGAGGACCTCAAACCAGGAATGCAGTACGCAGAAGAGCAGCTCTTGATAAAGAAGCCCAAATGAAGCCTGTAAATGGTGACTCAACTTCTGAGGATGAGGATTTGGACATATCCCCTGTTGAGATTGATGAGGCGTTGGTAATTGAAGATGATGATATCTCTGATGATGAAGATGATGACCAGGAAGATGTTTTGAGGGATGATTCTCTTCCTGTTTGCTTGCCTGACAAAGTACATGATGTGAAATTGGGTGAAACTGAGGAGACTATTGTGGCTCCTGCAACAGGAGATGGCCAGACTAATGCAGCCTCAGGTTCAAGCAGCAAAGTTGGTAATGTCAGGGGATCAGATTCAGGTGATTTTAGGAGTACCTATTCTTCTGGCTCAAGAGGCACAATGTCGTTTGCTGCTGCTGCCATGGCCGGGCTTGGATCTGCTAATAGCAGAGGGATCAGGGGTGGAAGAGATCGGCAGGGGCGCCCATTGTTTGGTAGTTCTAATGATCCTCCTAAGCTGATCTTTACTTGCTGTGGAAAGCAGCTTAATAGGCATTTAACTATATACCAGGCAATTCAAAGACAGCTTGTGGTAGATGAGGATGATGATGACAGGTTTGCTGGCACTGACTATGTATCCAGTGATGGAAGCAGACTGTGGGGTGATATTTACACTGTAACTTATCAGAGGGCTGATAGCCAAGCAGATAGGGCTTCCACTGGAGGTTCAAGTTCTGGCGCTTCAAAATCTGGCAAAGCTGGTTCTGTGTCAAATTCCAGTTCTGAAGCTAAGTTGCATCAGACATCTGTTCTAGATAGCATCTTGCAGGGAGAATTGCCTTGTGAGCTGGAGAAATCTAATCCTACATACAATATATTGGCCCTTTTGCGTGTGTTGGAGGGCTTGAACCAGCTTGCACCTCGCTTGAGGGCCCAGGTGGTTACTGATTGCTTTGCTGAGGGAAAAATTTTGGATTTAGATGAGTTAGGTCTTACCACTGGCGCTAGGGTTGCTTCAGAAGAATTCATAAGCAGCAAGCTTACTCCAAAATTAGCTAGGCAAATACAAGATGCTCTTGCCCTATGCAGTGGGAGTCTTCCCTCATGGTGTTACCAGTTAACTAAAGCTTGCCCATTTTTGTTTCCTTTTGAGACCCGGCGACAGTACTTCTATTCAACTGCCTTTGGGTTATCCCGTGCACTATATCGACTTCAGCAGCAGCAGGGTGCTGATGGTCATGGATCAACGAATGAAAGAGAGGTTAGGGTTGGGAGATTGCAGCGCCAAAAGGTTCGTGTCTCTCGGAACCGCATTTTGGATTCTGCTGCTAAAGTTATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTTGAATATTTTGGTGAAGTCGGAACTGGGTTGGGTCCCACCCTTGAGTTTTATACACTTCTAAGTCATGACTTACAAAAAGTTGGACTACAGATGTGGAGATCGGATTCTTCAGAGAAATATCAAATGGACATTGATGGTAATGAAAAGAAATTGAAAAGCGATGTTATTGGAGATGGAGAAATTGTTCAAGCTCCTCTTGGGTTATTCCCACGACCTTGGCCTTCAAATACCGATGTATCAGAGGGTAGCCAGTTTTTCAAAGCTATTGAGTATTTCCGGCTTTTGGGTCGTGTAGTGGCGAAAGCTCTACAAGATGGTCGTTTGTTGGATTTGCCATTGTCGGTGGCATTTTATAAGCTTGTTCTTGGTCAAGAGCTTGATTTGCATGACATTCTTTACATTGATGCTGAGCTTGGAAAAACTTTGCAAGAGTTGAATGCAATTGTTGTCCGGAAATATCATATAGATTCTACTGGTGGTAGCTATACTGATAAGACTGGTAATTTACATTTTCGTGGGGCCCCAATTGAAGATCTCTGCTTGGATTTCACCCTTCCTGGTTACCCAGGGTACATCTTGAAATCAGGAGATGAAATTGTTGACATCAATAATTTAGAGGAGTACATATCCTTGGTGGTTGATGCAACTGTCAAGACTGGAATCATACGTCAAATGGAAGCATTTAGAGCAGGATTCAATCAGGTTTTTGATATCTCATCTTTGCAAATATTCACTCCCCAAGAACTGGACTATTTGCTTTGTGGACGCAGAGAGTTGTGGAAGGCTGAGACATTAGTTGACCATATAAAATTTGACCATGGGTACACTGCCAAGAGCCCAGCCATAGTCAATTTGCTTGAAATCATGGGAGAGTTTACACCGGAGCAGCAGCGTGCCTTCTGTCAATTTGTCACTGGTGCTCCTAGGCTGCCACCTGGTGGACTTGCTGTTCTGAACCCAAAACTAACGATTGTGAGGAAGCTCTCATCAACTGCAGCTAATGCTTCAGCTAATGGGAATGGGCCTTCGGAATCAGCAGATGATGACTTGCCAAGTGTGATGACGTGTGCCAACTACCTGAAGCTTCCTCCTTATTCTACCAAGGAAATCATGTACAAGAAGCTACTCTATGCAATCAATGAAGGCCAGGGGTCCTTTGATTTGTCATGA 5712 0.4592 METRSRKRAEASSAAPSSSSSGPTTRSSNKRARLNNNNNTNTSSSSASATASTTAAIITTRSRASRSNKDPPPPKNSPLPPPAPPMDSNESSGSRRNRGKNSDRDNSDKGKEKEHDVRVRDRDAERGLALNMESGGVGDDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSSSASHQSGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNVSVSPALSRPPDQIFEIVNLANELLPPLPQGTISLPVSSNLFVKGPVIRKSAAGSSGKQEDTNGNVTEISSREKLLNDQPELLQQFAMDLLPVLVQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALQIAEVLMEKLPGTFSKMFIREGVVHAVDQLILPGISTNVPTQAASAEKDNDSISGTSSRSRRYRRRSGNNNPEGNPLDDLKSPASVNVGSPPSSLDVPAVNSSIRSSVSTAAKAFKDKYFPSDPGAVEVGVTDDLLRLKNLCVKLNVGVDDQRSNGKGKSKTSGFVVEEISATKEEYLIGLISDMLMELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDRTPETNLPKLRQQALMRFKLFIAVALPSSTDDVGVLAPMTVLVQKLQNALSSLERFPVVLSHSARTTSGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAIEEFLWPRIQRSESGQKSTVPAGNSESGTTPTAAGVSSPSTSTPSTTRRHSTRSRSSVNIGDTPRKEMTQDKGTSSSKAKGKAVLKPAQEESRGPQTRNAVRRRAALDKEAQMKPVNGDSTSEDEDLDISPVEIDEALVIEDDDISDDEDDDQEDVLRDDSLPVCLPDKVHDVKLGETEETIVAPATGDGQTNAASGSSSKVGNVRGSDSGDFRSTYSSGSRGTMSFAAAAMAGLGSANSRGIRGGRDRQGRPLFGSSNDPPKLIFTCCGKQLNRHLTIYQAIQRQLVVDEDDDDRFAGTDYVSSDGSRLWGDIYTVTYQRADSQADRASTGGSSSGASKSGKAGSVSNSSSEAKLHQTSVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVVTDCFAEGKILDLDELGLTTGARVASEEFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSDSSEKYQMDIDGNEKKLKSDVIGDGEIVQAPLGLFPRPWPSNTDVSEGSQFFKAIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVLGQELDLHDILYIDAELGKTLQELNAIVVRKYHIDSTGGSYTDKTGNLHFRGAPIEDLCLDFTLPGYPGYILKSGDEIVDINNLEEYISLVVDATVKTGIIRQMEAFRAGFNQVFDISSLQIFTPQELDYLLCGRRELWKAETLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAANASANGNGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS* 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3474 1903 SUPERFAMILY ARM repeat 195 666 IPR016024 -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 71 87 - -
Aev04g3474 1903 Gene3D Hect, E3 ligase catalytic domain 1774 1901 - -
Aev04g3474 1903 SUPERFAMILY Hect, E3 ligase catalytic domain 1477 1896 IPR035983 GO:0004842
Aev04g3474 1903 MobiDBLite consensus disorder prediction 977 1029 - -
Aev04g3474 1903 CDD HECTc 1485 1898 IPR000569 GO:0004842
Aev04g3474 1903 SMART hect_3 1496 1903 IPR000569 GO:0004842
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1203 1223 - -
Aev04g3474 1903 Pfam HECT-domain (ubiquitin-transferase) 1533 1903 IPR000569 GO:0004842
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1 149 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 977 1095 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 670 728 - -
Aev04g3474 1903 ProSiteProfiles HECT domain profile. 1603 1903 IPR000569 GO:0004842
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1150 1185 - -
Aev04g3474 1903 Gene3D Hect, E3 ligase catalytic domain 1714 1734 - -
Aev04g3474 1903 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 81 1903 - -
Aev04g3474 1903 Gene3D Hect, E3 ligase catalytic domains 1425 1663 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1290 1317 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 93 128 - -
Aev04g3474 1903 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 81 1903 IPR045322 GO:0006511|GO:0061630
Aev04g3474 1903 Gene3D Hect, E3 ligase catalytic domains 1735 1767 - -
Aev04g3474 1903 SMART arm_5 309 349 IPR000225 GO:0005515
Aev04g3474 1903 SMART arm_5 226 267 IPR000225 GO:0005515
Aev04g3474 1903 SMART arm_5 352 390 IPR000225 GO:0005515
Aev04g3474 1903 MobiDBLite consensus disorder prediction 10 70 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1061 1075 - -
Aev04g3474 1903 Gene3D - 183 502 IPR011989 -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 670 686 - -
Aev04g3474 1903 MobiDBLite consensus disorder prediction 1147 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3474 Aev-Chr4 32981179 32990081 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3474 K10590 - gmx:100783336 3023.03