Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3462 ATGGACCTTAACTTCTCCGTGAACCACCACCGTCACACTCTCAGATTCACTTCTTCTTCTTCCTCTTCCTCTTGCTCTTCCTTCTCCCTCTCTTCTCTCCGCTCCTTCCGAACGCACTTTCTCGGTTCCGCCAACTCTCTCCGGCCACCGCCCTCGCTTCGATCTTCCAAGAAATGCAACGGCAGGTTAGGGCTACTCCGTCTCCATTCCCCTCGCTTCGTCTTCAAGGCTTCCTTCCATTCTCACTCTGTCGTCGTCGTCGTCATCCTCGTCACTCTCACCGCCGTTTCCTTCCTCCGATTCACTCTCAACAACAAAAAGAAGCATCTCAATCAGAGACGTGGACGCCCGAACTTTGCATTATCGCCGCAAGGAAGTAATGTTGGAAACCAGGTCATTGAAAGCCAGATTCTTGGTTTTCAGGAATTCCAAACGGATAACTCACTGAATGAAATTGGAAATTTGAAAGATCACCATTCGGAAGATGATAGTGTTTTCAAGGACAAAGAGTTCCAGCTTCCACAATTACAATCGTCAATGGTTCTGACTAACATGTCAGGCTCATCTTCTTCTGTTCTTGACTCTAGTGTTAATAATAGCAGCACAAAGGTTTTGGAAGACTCTTTTTTGCAAGTGGCTTTCCCATCAAGTTCTTTACAACCTCTTGCTTTTGCTGAAGAGATGGCTTTACAAGTAGAAGAAAACCAAGACCAAGACCAAGTTGACTCCAATCCTGAGTCACCTTTGAATATAGTTGAAACTGAGCATAGTGCTTCTTCTGACTGTGTAAAAAACAAAGTCACTACAATCAATGAGCATACTAAAGAAAACATTGAACTTGGTGCAATCAGCTTCGATCCCCTCTTTGGTGAATCAGCTAGGCAAGAGCTGTACATGTTTTATGAGGCTAACAAGTCTGCAATTGGATCCATGTCACCACCGAGCAGTTTAAAGTCATTATCTCCGCATGCTTCTACTAATAATATAAAAGGATTGCCCTCAGCAGCTGGAAATACCACACTAAAAGGATCCGAATTATCCACAGATATTTCTCTACAAAGTGCAGAGTATGTTAAAGGAGCGGTACCAATTTCCAGTCATAGAGAAGGCTACCCTCCACAACATGGAAGTACAAACTTGAGGAAAGGAAGCAGATCTCTGAGAGACAGGGAAGGAAACTATCTGAATCATACTAGTAACAAAGTTTTCCCCCCGACTGCCCACTTAATCAGGGTGCATTTTGATCAGAAAAATGATCACACCGGGGTGCATTTTGATCAGAAAAATGATCACACCATGGTGCATCTTGATCAGAAAAATGATCAAACCAGGGTGCATGATGATCAGAAAAATGATCATTCAGAGTATCTAAGCAGATATAATAATCTGATAAAAGCTGGGAGGTTACATGAATGTGTGGAATTGCTTAAAAATATGGAGATGAAGGGTTTATTAGATATGAACAAGATTTATCATGCCAAGTTTTTTAACATCTGCAAGAGAAAAAAGGGTGTTAAAGAAGCTTTTGATTACATAAGGCTAATTCCAAATCCAACGTTGAGTACATTTAATATGCTTATGTCAGTTTGTACAGGCTCCCAAGATTCAGAAGGGGCTTTCCAAGTGTTGGAGCTTCTTAAGGACGCTCAACTAGAACCTGATTGCAAACTTTATACCACTCTGATTTCAACTTGTGCTAAGAGTGGAAAAGTTGATAAAATGTTTGAAGTGTTTCACAAGATGGTTAATTCCGGAGTGGAGCCTAATGTTCTTACATATGGAGCACTTATTGATGGCTGTGCTAGAGCTGGGCAAGTAGCTAAAGCATTTGGTGCTTATGGGATTCTGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCCGCATGTGCCAAGTCAGGAGCAGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAACACAGCCCATTGACCCAGATCACATAACTTTAGGTGCATTGATGAAGGCATGCACAAATGCTGGTCAGGTTGAGCGGGCACGTGAAGTGTATAAGATGTTACAAAAGTATAATGTAAAGGGAACCCCAGAAGTTTACACTATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTGGTCCCTGATGAGATGTTTCTGAGTGCACTGATAGATGTTGCTGGACATGCTAAAAAGCTGGATGCTGCCTTTGAAGTCATGAAAGAAGCCCGTAAAGGAGGAAAACATATTGGAATAATGACATATAGCTCACTGATGGGTGCCTGTAGCAATGCAAAAAATTGGGAGAAAGCATTGGAGTTATACGAATATCTCAAATCTCATAAATTGGTGCAAACAGTTTCAACAGTTAATGCTTTGCTCACTGCACTTTGTGATGGAGATCAGTTTCAGAAGGCTTTGGAAGTTCTATCTGAAATGAAAGAATTGGGACTGTGCCCAAACAGTATCACCTTCTCAATACTTATAGTGGCAAGTGAGAAAAAGGATGATATGGAAGCTGCTCAAATGCTTCTTTCTCAAGCCAAAATGGATGGTGCTGCCCCTAATCTCATCATGTGCCGATGCATAATTGGAATGTGCCTACGGAGATTTGAGAAGGCTTGTGTTGTTGGTGAATCCGTTTTACCTCATGACTCAGGAAGGTCACAAGTGGATAATAAATGGACATCACTGGCTTTAATGGTGTATCGTGAAACAATTGGAGCTGGTGAAAAGCCTACAAGTGAAATATTGTCACAAATTCTGGGATGCCTGCAACTCCCTTACGACGCATCTGTCAAAAATAGACTAGTTGAAAACCTGGGAGTAAGTGCTGATTCTTCAAGAAGCTCAAACCTCTGTTCACTGGTGGATGGTTTTGGAGAATATGATCCTCGTGCTTTTTCAATACTTGAGGAAGCTGCTTCACACGGAGTTGTTCCATCTGTATCATTTAAAGTGAGTCCTATTGTTGTTGATGTTAAGGATATGCATCCTTCTACTGCAGAGGTATACCTCTTAACCGTTATAAAAGGTCTCAAGCATCGACTAGCAGCAGGTGCAAAATTACCCAACGTAATCATCTTGTTGCCAGTAGAGAATACGAAAGTTTTGTCTTCCAAGGGGGAAAAGATTATTAACCTTGCTGGAAGGGTTGGCCAAGCACTTGCATCGTTATTGAGGAGACTCCAGATTGCTTACCGGGGTAATGAATCAAATGGGAAGCTAAGAATTAATGGTCAAGCTCTGAGAAAGTGGCTTCAACCAAAACTTGAATCTCCCTTCGGCGGAAAACCAGGTGAGTGGAACTCGTTCAACGGAAAACCAGGTGACTGGAACTCATTCAACGGAAAACCAGGTGACTGGAATCCATCCCTATCACCACTGGGCAAAAGCATTAGCCATCAGCAGCGAAACATTCGGACTGGAAATCTATCTTTGGACTAA 3492 0.4227 MDLNFSVNHHRHTLRFTSSSSSSSCSSFSLSSLRSFRTHFLGSANSLRPPPSLRSSKKCNGRLGLLRLHSPRFVFKASFHSHSVVVVVILVTLTAVSFLRFTLNNKKKHLNQRRGRPNFALSPQGSNVGNQVIESQILGFQEFQTDNSLNEIGNLKDHHSEDDSVFKDKEFQLPQLQSSMVLTNMSGSSSSVLDSSVNNSSTKVLEDSFLQVAFPSSSLQPLAFAEEMALQVEENQDQDQVDSNPESPLNIVETEHSASSDCVKNKVTTINEHTKENIELGAISFDPLFGESARQELYMFYEANKSAIGSMSPPSSLKSLSPHASTNNIKGLPSAAGNTTLKGSELSTDISLQSAEYVKGAVPISSHREGYPPQHGSTNLRKGSRSLRDREGNYLNHTSNKVFPPTAHLIRVHFDQKNDHTGVHFDQKNDHTMVHLDQKNDQTRVHDDQKNDHSEYLSRYNNLIKAGRLHECVELLKNMEMKGLLDMNKIYHAKFFNICKRKKGVKEAFDYIRLIPNPTLSTFNMLMSVCTGSQDSEGAFQVLELLKDAQLEPDCKLYTTLISTCAKSGKVDKMFEVFHKMVNSGVEPNVLTYGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIAACAKSGAVDRAFDVLAEMAAETQPIDPDHITLGALMKACTNAGQVERAREVYKMLQKYNVKGTPEVYTIAINSCSQTGDWEFACSVYNDMTQKGVVPDEMFLSALIDVAGHAKKLDAAFEVMKEARKGGKHIGIMTYSSLMGACSNAKNWEKALELYEYLKSHKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKELGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKMDGAAPNLIMCRCIIGMCLRRFEKACVVGESVLPHDSGRSQVDNKWTSLALMVYRETIGAGEKPTSEILSQILGCLQLPYDASVKNRLVENLGVSADSSRSSNLCSLVDGFGEYDPRAFSILEEAASHGVVPSVSFKVSPIVVDVKDMHPSTAEVYLLTVIKGLKHRLAAGAKLPNVIILLPVENTKVLSSKGEKIINLAGRVGQALASLLRRLQIAYRGNESNGKLRINGQALRKWLQPKLESPFGGKPGEWNSFNGKPGDWNSFNGKPGDWNPSLSPLGKSISHQQRNIRTGNLSLD* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 664 694 IPR002885 -
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 804 836 IPR002885 -
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 592 624 IPR002885 -
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 769 799 IPR002885 -
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 699 732 IPR002885 -
Aev04g3462 1163 TIGRFAM PPR: pentatricopeptide repeat domain 557 590 IPR002885 -
Aev04g3462 1163 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 77 1163 - -
Aev04g3462 1163 MobiDBLite consensus disorder prediction 1142 1163 - -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 624 658 IPR002885 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 554 588 IPR002885 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 661 695 IPR002885 -
Aev04g3462 1163 Pfam Pentacotripeptide-repeat region of PRORP 669 811 IPR033443 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 696 730 IPR002885 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 801 835 IPR002885 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 589 623 IPR002885 -
Aev04g3462 1163 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 766 800 IPR002885 -
Aev04g3462 1163 Gene3D Tetratricopeptide repeat domain 414 655 IPR011990 GO:0005515
Aev04g3462 1163 Gene3D Tetratricopeptide repeat domain 656 766 IPR011990 GO:0005515
Aev04g3462 1163 Pfam PPR repeat family 558 602 IPR002885 -
Aev04g3462 1163 Pfam Pentatricopeptide repeat domain 824 882 IPR002885 -
Aev04g3462 1163 Pfam PPR repeat 463 484 IPR002885 -
Aev04g3462 1163 Gene3D Tetratricopeptide repeat domain 772 891 IPR011990 GO:0005515
Aev04g3462 1163 MobiDBLite consensus disorder prediction 1109 1163 - -
Aev04g3462 1163 MobiDBLite consensus disorder prediction 364 385 - -
Aev04g3462 1163 Pfam PPR repeat 619 651 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3462 457 885 Glycosyltransferase AT1G05670 24.336 4.68e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3462 - - gmx:100814164 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3462 04 32901863 32915348 Aev04g3462 04 32901863 32915348 ECH