Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3415 ATGCCAGCCTTGGCTTGCTGCGTGGACGCTGCACCTGCTCCTCCTGGCTACGCTCTTGCTGGGGACATCTCTCTTCCGCCGCCGGTCACATTTTCCGGGGTACTGCCGGAGACAACCGACGACGATGAAAGCTTCCTTTGGTCGCCCTCCATGTCCTCCAGCCTCTACAGGATTGATGGCTGGGGCGCTCCCTATTTCGCCGTCAACTCCGCCGGCAACATCGCGGCCCGCCCACACGGCCCTGGAACCCAGTGTCACCAGGAGATCGATCTGCTCAAAATCGTGAAGAAGGCTTCGGGTCCTAAATCCTCCGGCGGGCTTGGGCTTCAACTGCCCCTCATCGTCCGCTTCCCGGACATTCTCAAGAACCGCCTCGAGTCCCTCCAATCAGCTTTCGAGTTCGCGGTCCAATCGCTGGGGTATGATGGTCATTACCAGGGTGTTTATCCTGTGAAATGCAACCAGGACCGGTTCGTCGTGGAGGACATAGTGAAATTCGGGTCACCGTTCCGGTTCGGACTCGAAGCTGGGTCCAAACCGGAGCTTCTTCTGGCCATGACGTGTTTGTGCAAGGGGAGTCCAGAAGCGTTTCTTGTTTGCAATGGCTTCAAGGACAGAGAGTATATCTCTCTGCTTTTACGCAGGAAGCTAGCTTTGAACACGGTGATTGTTCTTGAGCAGGAGGAAGAGCTTGATTGGTGGGTTGAGATCAGCAAAAACTCTGCATTCGTCCCGTGA 738 0.5623 MPALACCVDAAPAPPGYALAGDISLPPPVTFSGVLPETTDDDESFLWSPSMSSSLYRIDGWGAPYFAVNSAGNIAARPHGPGTQCHQEIDLLKIVKKASGPKSSGGLGLQLPLIVRFPDILKNRLESLQSAFEFAVQSLGYDGHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMTCLCKGSPEAFLVCNGFKDREYISLLLRRKLALNTVIVLEQEEELDWWVEISKNSAFVP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3415 245 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 127 232 IPR022644 GO:0003824
Aev04g3415 245 PRINTS Arginine decarboxylase signature 199 214 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aev04g3415 245 PRINTS Arginine decarboxylase signature 117 132 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aev04g3415 245 PRINTS Arginine decarboxylase signature 224 245 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aev04g3415 245 PRINTS Arginine decarboxylase signature 141 155 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aev04g3415 245 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 149 167 IPR022653 -
Aev04g3415 245 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 173 185 IPR000183 GO:0003824
Aev04g3415 245 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 149 167 IPR000183 GO:0003824
Aev04g3415 245 SUPERFAMILY PLP-binding barrel 117 237 IPR029066 -
Aev04g3415 245 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 52 139 IPR009006 GO:0003824
Aev04g3415 245 PANTHER ARGININE DECARBOXYLASE 1 244 IPR002985 GO:0006527|GO:0008295|GO:0008792
Aev04g3415 245 Gene3D Alanine racemase 140 244 IPR029066 -
Aev04g3415 245 PANTHER ARGININE DECARBOXYLASE 1 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3415 K01583 - gmx:548071 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3415 04 32756271 32757008 Aev04g3415 04 32756271 32757008 ECH